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    • Sample ID Gene Symbol Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
    TCGA-CS-4944-01A NBPF25P LGG chr1 145587889 145587889 G A splice_region_variant;non_codi PASS 0.167567568
    TCGA-CS-4944-01A CDC42BPA LGG chr1 227160627 227160627 T C p.K203K synonymous_variant PASS 0.331125828
    TCGA-CS-4944-01A OR14A16 LGG chr1 247815351 247815351 G T p.P127T missense_variant PASS 0.301675978
    TCGA-CS-4944-01A TOGARAM2 LGG chr2 29024341 29024341 G A p.R607H missense_variant PASS 0.185185185
    TCGA-CS-4944-01A WDR75 LGG chr2 189448397 189448397 T C p.S35S synonymous_variant PASS 0.375
    TCGA-CS-4944-01A IDH1 LGG chr2 208248388 208248388 C T p.R132H missense_variant PASS 0.296703297
    TCGA-CS-4944-01A COL6A3 LGG chr2 237372025 237372025 C T p.R1331H missense_variant PASS 0.382352941
    TCGA-CS-4944-01A SLC25A36 LGG chr3 140963221 140963221 A G p.M127V missense_variant PASS 0.348837209
    TCGA-CS-4944-01A UGT2A3 LGG chr4 68929817 68929817 T C p.E527G missense_variant PASS 0.355769231
    TCGA-CS-4944-01A PIK3R1 LGG chr5 68226966 68226967 - G p.A98Gfs*8 frameshift_variant PASS 0.236363636