BrainBase a curated knowledgebase for brain diseases

  • Home
  • Variation
    • Sample ID Gene Symbol Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
    TCGA-DU-A6S6-01A VANGL2 LGG chr1 160415898 160415898 C T p.R21C missense_variant PASS 0.142857143
    TCGA-DU-A6S6-01A PTCD3 LGG chr2 86121493 86121493 C G p.L185V missense_variant PASS 0.38028169
    TCGA-DU-A6S6-01A ADAM23 LGG chr2 206557449 206557449 A T p.H319L missense_variant PASS 0.4625
    TCGA-DU-A6S6-01A IDH1 LGG chr2 208248388 208248388 C T p.R132H missense_variant PASS 0.3
    TCGA-DU-A6S6-01A TRIM71 LGG chr3 32891422 32891422 G A p.E740K missense_variant PASS 0.391304348
    TCGA-DU-A6S6-01A SLC17A4 LGG chr6 25770947 25770947 T A p.I214N missense_variant PASS 0.5
    TCGA-DU-A6S6-01A ARID1B LGG chr6 157203986 157203986 A G p.N1659S missense_variant PASS 0.428571429
    TCGA-DU-A6S6-01A PC LGG chr11 66851836 66851836 C - p.A646Pfs*102 frameshift_variant PASS 0.285714286
    TCGA-DU-A6S6-01A INPPL1 LGG chr11 72238106 72238106 G A p.R1206Q missense_variant PASS 0.318181818
    TCGA-DU-A6S6-01A DPPA3 LGG chr12 7715185 7715185 G A p.A29T missense_variant;splice_region PASS 0.591836735