Species | Gene alias | ENTREZ ID | Ensembl ID | UniProt ID | Pfam ID | Orthologs |
---|---|---|---|---|---|---|
Mus musculus | 9030024J15Rik,AI552599,Erb,Erbb,Err,Errb1,Errp,Wa,Wa5,wa-2,wa2,EGFR | 13649 | ENSMUSG00000020122 | Q9WVF5,Q01279,Q3TQS6,Q9EP98 | PF00757,PF01030,PF07714,PF14843 | EGFR (1956, Homo sapiens) |
No. of publications >=
|
log2FC
The median log2 fold-change of expression (FDR < 0.05) in a cell cluster to that in all other cells among the available scRNA-seq samples
>=
|
Highly expressed ratio
Number of samples in which genes are more highly expressed in this cell type compared to other cell types (log2FC > 0.25, FDR < 0.05) divided by number of total samples for the cell type
>=
|
Specificity score
The median cell specificity score (calculated by Jensen-Shannon divergence score, ranging from 0 to 1) among available scRNA-seq samples
>=
|
Conservation score
Number of ortholog genes which are also reported as cell markers for this cell type in other species
>=
|
Total | |
---|---|---|---|---|---|---|
Cell Taxonomy ID | Cell type | Cell ID | Species | Tissue | Tissue ID | Condition | Disease ID | Source | PMID |
---|---|---|---|---|---|---|---|---|---|
Cell type | No. of total samples (E) | No. of highly expressed samples (HE, FDR<0.05) | Highly expressed ratio (HE/E) |
---|
Species | Sample | Condition | Cell type | log2FC |
Pct.cell type
The expression percentage of this gene in this cell type
|
Pct.others
The expression percentage of this gene in other cell types
|
P value | FDR |
---|
Species | Sample | Condition | Cell type |
Specificity score
Jensen-Shannon (JS) divergence score (0-1) is calculated to quantify the cell type specificity of one cell marker (Cabili MN et al., 2011 ).
|
---|
Ortholog | ||||
---|---|---|---|---|
Species | Cell type | Cell marker | ENTREZ ID | No. of publications |
Species | Evidence | Antibody | Protein class |
---|