Species | Gene alias | ENTREZ ID | Ensembl ID | UniProt ID | Pfam ID | Orthologs |
---|---|---|---|---|---|---|
Homo sapiens | BCC7,BMFS5,LFS1,P53,TRP53 | 7157 | ENSG00000141510 | K7PPA8,P04637,Q53GA5,H2EHT1,A0A087X1Q1,A0A087WXZ1,A0A087WT22 | PF00870,PF07710,PF18521,PF08563 | - |
No. of publications >=
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log2FC
The median log2 fold-change of expression (FDR < 0.05) in a cell cluster to that in all other cells among the available scRNA-seq samples
>=
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Highly expressed ratio
Number of samples in which genes are more highly expressed in this cell type compared to other cell types (log2FC > 0.25, FDR < 0.05) divided by number of total samples for the cell type
>=
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Specificity score
The median cell specificity score (calculated by Jensen-Shannon divergence score, ranging from 0 to 1) among available scRNA-seq samples
>=
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Conservation score
Number of ortholog genes which are also reported as cell markers for this cell type in other species
>=
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Total | |
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Cell Taxonomy ID | Cell type | Cell ID | Species | Tissue | Tissue ID | Condition | Disease ID | Source | PMID |
---|---|---|---|---|---|---|---|---|---|
Cell type | No. of total samples (E) | No. of highly expressed samples (HE, FDR<0.05) | Highly expressed ratio (HE/E) |
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Species | Sample | Condition | Cell type | log2FC |
Pct.cell type
The expression percentage of this gene in this cell type
|
Pct.others
The expression percentage of this gene in other cell types
|
P value | FDR |
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Species | Sample | Condition | Cell type |
Specificity score
Jensen-Shannon (JS) divergence score (0-1) is calculated to quantify the cell type specificity of one cell marker (Cabili MN et al., 2011 ).
|
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Ortholog | ||||
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Species | Cell type | Cell marker | ENTREZ ID | No. of publications |
Species | Evidence | Antibody | Protein class |
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