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    • Sample ID Gene Symbol Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
    TCGA-S9-A6TY-01A NIBAN1 LGG chr1 184884687 184884687 C G p.D183H missense_variant PASS 0.340425532
    TCGA-S9-A6TY-01A DNER LGG chr2 229588441 229588441 C T p.A211A synonymous_variant PASS 0.348837209
    TCGA-S9-A6TY-01A ATG4B LGG chr2 241655336 241655340 GTCCT - p.V151Efs*59 frameshift_variant PASS 0.384615385
    TCGA-S9-A6TY-01A CNTN4 LGG chr3 2571422 2571422 G C 5_prime_UTR_variant PASS 0.307692308
    TCGA-S9-A6TY-01A TEX55 LGG chr3 119146288 119146288 C T p.D33D synonymous_variant PASS 0.388888889
    TCGA-S9-A6TY-01A NLGN1 LGG chr3 174279389 174279389 A G p.H463R missense_variant PASS 0.183908046
    TCGA-S9-A6TY-01A ADAMTS6 LGG chr5 65273407 65273407 C A p.R518L missense_variant PASS 0.227586207
    TCGA-S9-A6TY-01A SPRY4 LGG chr5 142314301 142314301 G A p.R270C missense_variant PASS 0.125
    TCGA-S9-A6TY-01A DMTN LGG chr8 22080811 22080811 G A p.E322K missense_variant PASS 0.588235294
    TCGA-S9-A6TY-01A SVEP1 LGG chr9 110408793 110408793 C T p.P2269P synonymous_variant PASS 0.440789474