BrainBase a curated knowledgebase for brain diseases

Sample ID Gene Symbol Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
TCGA-12-0616-01A PADI3 GBM chr1 17266719 17266719 C T p.R137W missense_variant;splice_region PASS 0.341176471
TCGA-12-0616-01A HSPG2 GBM chr1 21860219 21860219 C T p.V1658M missense_variant PASS 0.339622642
TCGA-12-0616-01A NCMAP GBM chr1 24600963 24600963 G A p.V36I missense_variant PASS 0.324840764
TCGA-12-0616-01A TTC39A GBM chr1 51303090 51303090 C T p.V289M missense_variant PASS 0.444444444
TCGA-12-0616-01A DMRTB1 GBM chr1 53466627 53466627 C G p.P332A missense_variant PASS 0.282857143
TCGA-12-0616-01A SRSF11 GBM chr1 70237457 70237457 C G p.P208R missense_variant PASS 0.362903226
TCGA-12-0616-01A S100A7A GBM chr1 153419252 153419252 C T p.A83A synonymous_variant PASS 0.438095238
TCGA-12-0616-01A FDPS GBM chr1 155317992 155317992 C T p.R178C missense_variant PASS 0.322033898
TCGA-12-0616-01A ADCY10 GBM chr1 167837248 167837248 C T p.X1026_splice splice_donor_variant PASS 0.345794393
TCGA-12-0616-01A VIT GBM chr2 36808475 36808475 G A p.V450M missense_variant PASS 0.473684211