BrainBase a curated knowledgebase for brain diseases

Sample ID Gene Symbol Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
TCGA-12-0829-01A KCNAB2 GBM chr1 6098505 6098505 T C p.S345S synonymous_variant PASS 0.239669421
TCGA-12-0829-01A CAMTA1 GBM chr1 7663747 7663747 C T p.F400F synonymous_variant PASS 0.583941606
TCGA-12-0829-01A CAMTA1 GBM chr1 7664612 7664612 G T p.E689* stop_gained PASS 0.266666667
TCGA-12-0829-01A AADACL4 GBM chr1 12666461 12666461 A G p.H317R missense_variant PASS 0.168508287
TCGA-12-0829-01A CELA3B GBM chr1 21986733 21986733 A - intron_variant PASS 0.196078431
TCGA-12-0829-01A PLK3 GBM chr1 44801736 44801736 C A p.R184R synonymous_variant PASS 0.333333333
TCGA-12-0829-01A DHCR24 GBM chr1 54852224 54852224 G C 3_prime_UTR_variant PASS 0.195876289
TCGA-12-0829-01A DPYD GBM chr1 97920985 97920985 C T 5_prime_UTR_variant PASS 0.857142857
TCGA-12-0829-01A SARS2 GBM chr1 109213983 109213983 A C 5_prime_UTR_variant PASS 0.981746032
TCGA-12-0829-01A AMIGO1 GBM chr1 109508130 109508130 A G p.N261N synonymous_variant PASS 0.255319149