BrainBase a curated knowledgebase for brain diseases

Sample ID Gene Symbol Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
TCGA-14-1455-01A NR0B2 GBM chr1 26913571 26913571 C T p.E124K missense_variant PASS 0.422222222
TCGA-14-1455-01A SLC16A1 GBM chr1 112923975 112923975 C G intron_variant PASS 0.392857143
TCGA-14-1455-01A SYCP1 GBM chr1 114874517 114874517 C T p.R204W missense_variant PASS 0.419117647
TCGA-14-1455-01A CASQ2 GBM chr1 115705235 115705235 G A p.P299L missense_variant PASS 0.119047619
TCGA-14-1455-01A FGFR1 GBM chr1 152306686 152306686 G A p.H2734Y missense_variant PASS 0.152173913
TCGA-14-1455-01A FCRL6 GBM chr1 159810180 159810180 G A p.A325T missense_variant PASS 0.139720559
TCGA-14-1455-01A FCGR3B GBM chr1 161626342 161626342 C T p.R127K missense_variant PASS 0.472972973
TCGA-14-1455-01A USH2A GBM chr1 215675568 215675568 G A p.R4115C missense_variant PASS 0.477011494
TCGA-14-1455-01A LYST GBM chr1 235746475 235746476 AC - p.R2611Lfs*5 frameshift_variant PASS 0.424242424
TCGA-14-1455-01A CRIM1 GBM chr2 36547137 36547137 T G p.I967R missense_variant PASS 0.4140625