BrainBase
a curated knowledgebase for brain diseases
| Sample ID | Gene Symbol | Glioma Grade | Chr | Start Site | End Site | RET | ALT | Amino Acid Change | Effect | Filter | DNA VAF |
|---|---|---|---|---|---|---|---|---|---|---|---|
| TCGA-DU-8158-01A | ALDH4A1 | LGG | chr1 | 18883309 | 18883309 | G | A | p.S191S | synonymous_variant | PASS | 0.195652174 |
| TCGA-DU-8158-01A | ALDH4A1 | LGG | chr1 | 18883344 | 18883344 | G | C | p.L180V | missense_variant | PASS | 0.2625 |
| TCGA-DU-8158-01A | BRINP3 | LGG | chr1 | 190098362 | 190098362 | C | T | p.D653N | missense_variant | PASS | 0.384615385 |
| TCGA-DU-8158-01A | LRP1B | LGG | chr2 | 140516909 | 140516909 | C | G | p.G2710A | missense_variant | PASS | 0.27173913 |
| TCGA-DU-8158-01A | DNAH7 | LGG | chr2 | 196012898 | 196012898 | C | T | p.R293H | missense_variant | PASS | 0.425 |
| TCGA-DU-8158-01A | ZNF502 | LGG | chr3 | 44722497 | 44722497 | C | T | 3_prime_UTR_variant | PASS | 0.243243243 | |
| TCGA-DU-8158-01A | CACNA1D | LGG | chr3 | 53803544 | 53803544 | G | C | p.E1853Q | missense_variant | PASS | 0.334645669 |
| TCGA-DU-8158-01A | HLTF | LGG | chr3 | 149074309 | 149074309 | A | C | p.P145P | synonymous_variant | PASS | 0.596153846 |
| TCGA-DU-8158-01A | SLITRK3 | LGG | chr3 | 165188925 | 165188925 | G | T | p.P636T | missense_variant | PASS | 0.243902439 |
| TCGA-DU-8158-01A | TNFAIP8 | LGG | chr5 | 119356089 | 119356089 | T | - | 5_prime_UTR_variant | PASS | 0.333333333 |