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    • Sample ID Gene Symbol Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
    TCGA-FG-A4MW-01A ZBTB40 LGG chr1 22526255 22526255 G A p.E1193E synonymous_variant PASS 0.1875
    TCGA-FG-A4MW-01A PTCH2 LGG chr1 44828620 44828620 G A p.G492G synonymous_variant PASS 0.357142857
    TCGA-FG-A4MW-01A LHX8 LGG chr1 75130586 75130586 T G 5_prime_UTR_variant PASS 0.291666667
    TCGA-FG-A4MW-01A PHGDH LGG chr1 119712025 119712025 G A p.M1? start_lost PASS 0.290909091
    TCGA-FG-A4MW-01A LCE2A LGG chr1 152699096 152699096 C T p.G65G synonymous_variant PASS 0.39516129
    TCGA-FG-A4MW-01A PEAR1 LGG chr1 156914784 156914784 C T p.R1034C missense_variant PASS 0.3
    TCGA-FG-A4MW-01A LHX4 LGG chr1 180271824 180271824 T C intron_variant PASS 0.145985401
    TCGA-FG-A4MW-01A ZC3H11A LGG chr1 203849842 203849843 - G p.A586Gfs*61 frameshift_variant PASS 0.277777778
    TCGA-FG-A4MW-01A OBSCN LGG chr1 228350934 228350934 C T p.P6137L missense_variant PASS 0.19047619
    TCGA-FG-A4MW-01A COLEC11 LGG chr2 3643798 3643798 G A p.A166T missense_variant PASS 0.260273973