In order to comprehensively understand the transcriptome dynamics of soybeans, we analyzed soybean transcriptome data from two aspects: Bulk RNA-seq and Single cell RNA-seq.
The Bulk RNA-seq data consists of 28 Tissues Transcriptome dataset and 314 Tissues Transcriptome dataset.
The Single cell RNA-seq includes 5 Stereo-seq RNA-seq datasets and 7 single-cell datasets.
Bulk RNA-Seq Single cell RNA-seq
28 Tissues Transcriptome
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Transcriptome of ZH13/Wm82 in ~28 tissues and their homologous gene from pan-genome in 9 tissue.

314 Tissues Transcriptome
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Transcriptome of ZH13 in 314 samples. Sampling covers 13 tissues and 13 different Developing stages.

5 Stereo-seq Datasets
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SpaTial Enhanced REsolution Omics-sequencing (Stereo-seq) for root, shoot apical meristem, stem and folded leaf in vegetative cotyledon (VC) stage, for nodule collected 5 days after inoculation with Rhizobium strain USDA-110 at the same stage.
 

7 snRNA-seq Datasets
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Single-nucleus RNA sequencing (snRNA-seq) for the same tissues in Stereo-seq. In addition, the shoot apical meristem, stem and folded leaf were integrated analyzed. The root, nodule and another nodule samples collected 3 days after inoculation with Rhizobium strain USDA-110 were integrated analyzed.