CandiHap A haplotype analysis toolkit for natural variation study

Download and Install CandiHap

Download CandiHap for Linux (Debian, Fedora/Redhat, Ubuntu): CandiHap-1.3.0.zip

(Contains: CandiHap.pl, GWAS_LD2haplotypes.pl, vcf2hmp.pl, snpEff2hmp.pl)

 

Windows and Mac users most likely want one of these versions:

Download CandiHap for macOSCandiHap-1.3.0.dmg

Download CandiHap for WindowsCandiHap_win64_V1.3.0.zip

 

Dowload the teat data:

test_data.zip

 

Haplotype analysis for Sanger .ab1 files on Linux system:

sanger_CandiHap-1.0.1.zip and sanger_teat_data.zip

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