CandiHap A haplotype analysis toolkit for natural variation study

Download and Install CandiHap

Download CandiHap for Linux (Debian, Fedora/Redhat, Ubuntu): CandiHap-1.3.2.zip

(Contains: CandiHap.pl, GWAS_LD2haplotypes.pl, vcf2hmp.pl, snpEff2hmp.pl)

Windows users most likely want one of these versions:

Download CandiHap for Windows: CandiHap_win64_V1.3.0.zip

Dowload the teat data:

test_data.zip

Haplotype analysis for Sanger .ab1 files on Linux system:

sanger_CandiHap-1.0.1.zip and sanger_teat_data.zip