MLGO2 Genome comparative analysis and phylogenetic tree construction parallelization tool

We propose a method to encode genes in binary, using the algorithm of maximum likelihood method MLGO to reconstruct the evolutionary history of species and the phylogenetic tree that can represent the evolutionary relationship. On this basis, combined with the genome data of modern species, at the genome level, the PMAG algorithm is used to reconstruct the genome information of the extinct ancestral species on the phylogenetic tree. These two new algorithms have good calculation speed and robustness, and the calculation results are accurate. The web server developed based on MLGO and PMAG is currently the only server that can handle complex reorganization and copy events.