vcf_revise_ctg a tools using to improve assembly based genome sequences in FASTA format and error sites in VCF format
Introduction
vcf_revise_ctg is used to correct errors, including base error and small INDEL, in genome sequences.
Based on error sites in VCF format and genome, vcf_revise_ctg can replace errors in genome with alternate variants.
The output is the corrected genome sequences in FASTA format .
Publications
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Credits
- jue ruan ruanjue@caas.cn Developer
The Omics Technology Research Center, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, China
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Summary
| Accession | BT007282 |
|---|---|
| Tool Type | Toolkit |
| Category | Error correction |
| Platforms | Linux/Unix |
| Technologies | C |
| User Interface | Terminal Command Line |
| Input Data | FASTA, VCF |
| Download Count | 0 |
| Submitted By | cheng ai |