Accession

PRJCA000484

Title

The Establishment of Chromatin Accessibility Landscape during Human Early Embryogenesis

Relevance

Model organism

Data types

Whole genome sequencing
Epigenomics
Raw sequence reads

Organisms

Mus musculus
Homo sapiens

Description

chromatin accessibility landscape by characterizing DNase I hypersensitive sites (DHSs) in human embryos

Sample scope

Multiisolate

Release date

2018-03-09

Publication

PubMed ID	Article title	Journal name	DOI	Year
29526463	Chromatin Accessibility Landscape in Human Early Embryos and Its Association with Evolution.	Cell	10.1016/j.cell.2018.02.028	2018

Submitter

Lei Gao (gaol@big.ac.cn)

Organization

Beijing Institute of Genomics (BIG)

Submission date

2017-07-05

Project Data

Resource name	Description
BioSample (30) show	-
SAMC017364	human 8-cell embryo siSOX2#2 for RNA-seq
SAMC017363	human 8-cell embryo siSOX2#1 for RNA-seq
SAMC017362	human 8-cell siOCT4#2 for RNA-seq
SAMC017361	human 8-cell siOCT4#1 for RNA-seq
SAMC017360	human 8-cell siCTR for RNA-seq rep2
SAMC017359	human 8-cell siCTR for RNA-seq rep1
SAMC017358	mouse 4-cell siOCT4#2 for RNA-seq
SAMC017357	mouse 4-cell siOCT4#1 for RNA-seq
SAMC017356	mouse 4-cell siCTR for RNA-seq rep2
SAMC017355	mouse 4-cell siCTR for RNA-seq rep1
SAMC017354	Mouse blastocyst for DNase-seq rep2
SAMC017353	Mouse blastocyst for DNase-seq rep1
SAMC017352	Mouse morula for DNase-seq rep2
SAMC017351	Mouse morula for DNase-seq rep1
SAMC017350	Mouse 8-cell embryo for DNase-seq rep2
SAMC017349	Mouse 8-cell embryo for DNase-seq rep1
SAMC017348	Mouse 4-cell embryo for DNase-seq rep2
SAMC017347	Mouse 4-cell embryo for DNase-seq rep1
SAMC017346	Mouse 2-cell embryo for DNase-seq rep2
SAMC017345	Mouse 2-cell embryo for DNase-seq rep1
SAMC013227	DNase-seq blastocyst rep2
SAMC013226	DNase-seq blastocyst rep1
SAMC013225	DNase-seq morula rep2
SAMC013224	DNase-seq morula rep1
SAMC013223	DNase-seq 8-cell rep2
SAMC013222	DNase-seq 8-cell rep1
SAMC013221	DNase-seq 4-cell rep2
SAMC013220	DNase-seq 4-cell rep1
SAMC013219	DNase-seq 2-cell rep2
SAMC013218	DNase-seq 2-cell rep1
GSA (1)	-
CRA000297	Human early embryo DNase-seq