项目编号 PRJCA000751
项目标题 Expression landscape and evolutionary dynamics of circular RNAs in mammals
涉及领域 Evolution
数据类型 Transcriptome or Gene expression
物种名称 Mus musculus
Homo sapiens
Macaca mulatta
描述信息 In this study, we constructed long-insert (400-800 bp) RNA-seq libraries combined with longer reads (2 X 250 base paired-end) and high sequencing depth (10 + 25 Gb per sample) for all 34 tissues from human, macaque and mouse.
样品范围 Multispecies
发布日期 2019-01-18
出版信息
PubMed ID 文章标题 杂志名称 Doi 发表年份
30893614 Expanded Expression Landscape and Prioritization of Circular RNAs in Mammals Cell Reports 10.1016/j.celrep.2019.02.078 2019
38370635 Accurate Assembly of Circular RNAs with TERRACE bioRxiv 10.1101/2024.02.09.579380 2024
34698333 Sensitive, reliable and robust circRNA detection from RNA-seq with CirComPara2 Briefings in Bioinformatics 10.1093/bib/bbab418 2021
36592056 Systematic benchmarking of statistical methods to assess differential expression of circular RNAs Briefings in Bioinformatics 10.1093/bib/bbac612 2023
38609186 Systematic identification and characterization of exon–intron circRNAs Genome Research 10.1101/gr.278590.123 2024
39060030 Accurate assembly of circular RNAs with TERRACE Genome Research 10.1101/gr.279106.124 2024
33436621 isoCirc catalogs full-length circular RNA isoforms in human transcriptomes Nature Communications 10.1038/s41467-020-20459-8 2021
33074314 TransCirc: an interactive database for translatable circular RNAs based on multi-omics evidence Nucleic Acids Research 10.1093/nar/gkaa823 2020
34346525 Differential expression and regulation of MS4A family members in myeloid cells in physiological and pathological conditions Journal of Leukocyte Biology 10.1002/JLB.2A0421-200R 2021
40169448 Genome-wide profiling and functional characterization of circular RNAs in neural development and injury: insights from a rat model research Cellular and Molecular Life Sciences 10.1007/s00018-025-05665-1 2025
提交者 Peifeng Ji  (jipeifeng@biols.ac.cn)
提交单位 Beijing Institutes of Life Science, Chinese Academy of Sciences (BIOLS)
提交日期 2018-02-06

项目包含数据信息

资源名称 描述
BioSample (44)  show -
GSA (1) -
CRA000348 three_species_transcirptome