| Accession | PRJCA000902 | |||||||||||||||
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| Title | De novo assembly of Gmax_ZH13 | |||||||||||||||
| Relevance | Agricultural | |||||||||||||||
| Umbrella project |
MMDB: Molecular Module-based Designer Breeding Systems XDA08020000: Analysis of module systems and their coupling effects XDA08020200: Design of optimized path for assembly of multi-modules XDA08020202: Analysis and assembly of molecular module systems for high and stable yield in soybean |
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| Data types |
Genome sequencing and assembly
Raw sequence reads Assembly |
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| Organisms | Glycine max | |||||||||||||||
| Description | Here we report the de novo genome assembly of Zhonghuang 13 (Gmax_ZH13). Comparison analyses between this genome and the newest Williams 82 reference genome, we identified 270,938 (Zhonghuang 13) and 257,572 (Willams 82) structure variations between them including translocation and/or inversion events, long presence and small insertions events. Furthermore, a comprehensive gene co-expression network were established, which help us to mine potential key genes in controlling agronomical important traits. The genome will facilitate soybean genomics research and elite cultivar improvement. | |||||||||||||||
| Sample scope | Monoisolate | |||||||||||||||
| Release date | 2018-07-30 | |||||||||||||||
| Publication |
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| Grants |
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| Submitter | Yanting Shen (ytshen@genetics.ac.cn) | |||||||||||||||
| Organization | Institute of Genetics and Developmental Biology, Chinese Academy of Sciences | |||||||||||||||
| Submission date | 2018-06-06 |