| Accession |
PRJCA001046 |
| Title |
Dynamic landscapes and regulome of mRNA structure during zebrafish early embryogenesis |
| Relevance |
Model organism |
| Data types |
Transcriptome or Gene expression
|
| Organisms |
Danio rerio
|
| Description |
We resolved the RNA secondary structure during zebrafish early embryogenesis based on in vivo click selective 2'-hydroxyl acylation and profiling experiment (icSHAPE). We analysis the RNA structure dynamics among different development stages. Also, we study which factors regulatue maternal gene decay by RNA structure switch. |
| Sample scope |
Monoisolate |
| Release date |
2020-04-17 |
| Publication |
| PubMed ID |
Article title |
Journal name |
DOI |
Year |
| 32423473
|
RNA structural dynamics regulate early embryogenesis through controlling transcriptome fate and function
|
Genome Biology
|
10.1186/s13059-020-02022-2
|
2020
|
|
|
| Grants |
| Agency |
program |
Grant ID |
Grant title |
| Chinese Academy of Sciences (CAS)
|
Strategic Priority Research Program of Chinese Academy of Sciences (CAS)
|
XDA16010501
|
|
|
|
| Submitter |
boyang
shi (shiboyang@big.ac.cn)
|
| Organization |
Beijing Institute of Genomics, Chinese Academy of Sciences |
| Submission date |
2018-09-26 |
