项目编号 PRJCA001297
项目标题 Assembly and annotation of water buffaloes
涉及领域 Animal science
数据类型 Whole genome sequencing
Genome sequencing and assembly
Raw sequence reads
Genome sequencing
Assembly
物种名称 Bubalus carabanensis
Bubalus bubalis bubalis
描述信息 We assembled one female Fuzhong swamp buffalo and one female Murrah river buffalo using PacBio reads, which resulted in contig N50 sizes of 8.8 Mb and 3.1 Mb for swamp buffalo and river buffalo, respectively.
样品范围 Multispecies
发布日期 2019-02-26
出版信息
PubMed ID 文章标题 杂志名称 Doi 发表年份
Understanding divergent domestication traits from the whole-genome sequencing of swamp and river buffalo populations National Science Review 10.1093/nsr/nwaa024 2020
34573376 Evolutionary Analysis of OAT Gene Family in River and Swamp Buffalo: Potential Role of SLCO3A1 Gene in Milk Performance Genes 10.3390/genes12091394 2021
项目资金来源
机构 项目类型 授权项目ID 授权项目名称
Guangxi University NA
提交者 Xier Luo (1595240820@qq.com)
提交单位 Guangxi University
提交日期 2019-02-26

项目包含数据信息

资源名称 描述
BioSample (3) -
SAMC134151 Swamp buffalo for RNA-seq
SAMC063216 The genome of river buffalo
SAMC063215 The genome of swamp buffalo
GSA (2) -
CRA003762 Illumina sequence data for buffaloes
CRA002325 RNA-seq of swamp buffalo