| Accession |
PRJCA001333 |
| Title |
Post-transcriptional regulation by small RNAs in Hevea |
| Relevance |
Agricultural |
| Data types |
Transcriptome or Gene expression
|
| Organisms |
Hevea brasiliensis
|
| Description |
Role of small RNA on the regulation of genome expression has been intensively studied in model plants. By contrast, little is known on perennial plants but a few studies revealed specific small RNA-mediated posttranscriptional regulations. We completed the recent release of massive genomic, transcriptomic and micro-transcriptomic data by a degradome analysis in order to identify all mRNAs cleaved by small RNAs. This work revealed that latex cells had a high small RNA-mediated transcript cleavage activity by miRNA and phased siRNA compared to other tissues. Post-transcriptional regulation was observed at each step of the natural rubber biosynthesis pathway. The absence of a conserved pathway for ta-siRNA production as well as partial conservation of targets revealed a divergence in interspecific post-transcriptional regulation suggesting a possible role during plant speciation and adaptation to environmental stresses. This comprehensive analysis of posttranscriptional regulations at the genome-wide level revealed new insight into evolutionary mechanisms of RNA silencing |
| Sample scope |
Monoisolate |
| Release date |
2020-05-15 |
| Publication |
| PubMed ID |
Article title |
Journal name |
DOI |
Year |
|
|
Post-transcriptional regulation of several biological processes involved in latex production in Hevea brasiliensis
|
PeerJ
|
10.7717/peerj.8932
|
2020
|
|
|
| Grants |
| Agency |
program |
Grant ID |
Grant title |
| Campus France
|
|
41241QJ
|
Xu Guangqi Program
|
|
|
| Submitter |
Wu
Shuangyang (wushy@big.ac.cn)
|
| Organization |
Beijing Institute of Genomics, Chinese Academy of Sciences |
| Submission date |
2019-03-18 |
