Accession PRJCA001655
Title Widespread transcriptional responses to the thermal stresses are prewired in human 3D genome (ATAC-Seq)
Relevance Model organism
Data types Raw sequence reads
Organisms Homo sapiens
Description Widespread transcriptional responses to the thermal stresses are prewired in human 3D genome (ATAC-Seq)
Sample scope Monoisolate
Release date 2019-12-26
Publication
PubMed ID Article title Journal name DOI Year
34875002 DeNOPA: decoding nucleosome positions sensitively with sparse ATAC-seq data Briefings in Bioinformatics 10.1093/bib/bbab469 2022
35835565 Cell cycle arrest explains the observed bulk 3D genomic alterations in response to long-term heat shock in K562 cells Genome Research 10.1101/gr.276554.122 2022
Grants
Agency program Grant ID Grant title
No funding support
Submitter Zhihua    Zhang  (zlabbig@163.com)
Organization Beijing Institute of Genomics, Chinese Academy of Sciences
Submission date 2019-08-11

Project Data

Resource name Description
BioSample (4) -
SAMC309201 HS ATAC rep2
SAMC309200 HS ATAC rep1
SAMC089104 NM ATAC rep2
SAMC089103 NM ATAC rep1
GSA (1) -
CRA001891 Widespread transcriptional responses to the thermal stresses are prewired in human 3D genome (ATAC-Seq)