项目编号

PRJCA002103

项目标题

Rice genomes

涉及领域

Agricultural

数据类型

Whole genome sequencing
Transcriptome or Gene expression
Genome sequencing and assembly
Raw sequence reads
Genome sequencing
Assembly
Whole genome and Transcriptome sequencing

物种名称

Oryza sativa

描述信息

Raw data from multi sequencing technology for 32 rice genomes and transcriptome

样品范围

Multiisolate

发布日期

2021-05-25

出版信息

PubMed ID	文章标题	杂志名称	Doi	发表年份
38567138	A comprehensive evaluation of the potential of three next-generation short-read-based plant pan-genome construction strategies for the identification of novel non-reference sequence	Frontiers in Plant Science	10.3389/fpls.2024.1371222	2024
38307858	Dysfunction of duplicated pair rice histone acetyltransferases causes segregation distortion and an interspecific reproductive barrier	Nature Communications	10.1038/s41467-024-45377-x	2024
39087631	Conserved features and diversity attributes of chimeric RNAs across accessions in four plants	Plant Biotechnology Journal	10.1111/pbi.14437	2024

项目资金来源

机构	项目类型	授权项目ID	授权项目名称
Ministry of Science and Technology of the People's Republic of China (MOST)	National Key Technologies R&D Program	2016YFD0100400

提交者

hongwei lu (lhw516@126.com)

提交单位

Institute of Genetics and Developmental Biology, Chinese Academy of Sciences

提交日期

2020-01-04

项目包含数据信息

资源名称	描述
BioSample (116) show	-
SAMC351384	R527_Stem_5DAF
SAMC351383	R527_Stem_BF
SAMC351382	R527_Mechanical_pressure_temperature_stress_8
SAMC351381	R527_Mechanical_pressure_temperature_stress_7
SAMC351380	R527_Mechanical_pressure_temperature_stress_6
SAMC351379	R527_Mechanical_pressure_temperature_stress_5
SAMC351378	R527_Mechanical_pressure_temperature_stress_4
SAMC351377	R527_Mechanical_pressure_temperature_stress_3
SAMC351376	R527_Mechanical_pressure_temperature_stress_2
SAMC351375	R527_Mechanical_pressure_temperature_stress_1
SAMC351374	R527_Hypoxia_stress_4
SAMC351373	R527_Hypoxia_stress_3
SAMC351372	R527_Hypoxia_stress_2
SAMC351371	R527_Hypoxia_stress_1
SAMC351370	R527_Osmotic_Root_Stress
SAMC351369	R527_Osmotic_Root_CK
SAMC351368	R527_Osmotic_Shoot_Stress
SAMC351367	R527_Osmotic_Shoot_CK
SAMC351366	R527_Caryopsis_5
SAMC351365	R527_Caryopsis_4
SAMC351364	R527_Caryopsis_3
SAMC351363	R527_Caryopsis_2
SAMC351362	R527_Caryopsis_1
SAMC351361	R527_Panicle_2
SAMC351360	R527_Panicle_1
SAMC351359	R527_Leaf_4
SAMC351358	R527_Leaf_3
SAMC351357	R527_Leaf_2
SAMC351356	R527_Leaf_1
SAMC351355	RNA-seq of N22: Root
SAMC351354	RNA-seq of N22: Shoot
SAMC351353	RNA-seq of LJ: Root
SAMC351352	RNA-seq of LJ: Shoot
SAMC351351	NGS of LJ: whole genome
SAMC351350	NGS of ZH11: whole genome
SAMC351349	RNA-seq of YX1: Root
SAMC351348	RNA-seq of YX1: Shoot
SAMC351347	NGS of YX1: whole genome
SAMC351346	RNA-seq of Y58S: Root
SAMC351345	RNA-seq of Y58S: Shoot
SAMC351344	NGS of Y58S: whole genome
SAMC351343	RNA-seq of Y3551: Root
SAMC351342	RNA-seq of Y3551: Shoot
SAMC351341	NGS of Y3551: whole genome
SAMC351340	RNA-seq of WSSM: Root
SAMC351339	RNA-seq of WSSM: Shoot
SAMC351338	NGS of WSSM: whole genome
SAMC351337	RNA-seq of Tumba: Root
SAMC351336	RNA-seq of Tumba: Shoot
SAMC351335	NGS of Tumba: whole genome
SAMC351334	RNA-seq of TM: Root
SAMC351333	RNA-seq of TM: Shoot
SAMC351332	NGS of TM: whole genome
SAMC351331	RNA-seq of S548: Root
SAMC351330	RNA-seq of S548: Shoot
SAMC351329	NGS of S548: whole genome
SAMC351328	NGS of R527: whole genome
SAMC351327	RNA-seq of R498: Shoot
SAMC351326	NGS of NamRoo: whole genome
SAMC351325	RNA-seq of Lemont: Root
SAMC351324	RNA-seq of Lemont: Shoot
SAMC351323	NGS of Lemont: whole genome
SAMC351322	RNA-seq of Kosh: Root
SAMC351321	RNA-seq of Kosh: Shoot
SAMC351320	NGS of Kosh: whole genome
SAMC351319	RNA-seq of J4155: Root
SAMC351318	RNA-seq of J4155: Shoot
SAMC351317	NGS of J4155: whole genome
SAMC351316	RNA-seq of IR64: Root
SAMC351315	RNA-seq of IR64: Shoot
SAMC351314	NGS of IR64: whole genome
SAMC351313	RNA-seq of II32: Root
SAMC351312	RNA-seq of II32: Shoot
SAMC351311	NGS of II32: whole genome
SAMC351310	RNA-seq of G8: Root
SAMC351309	RNA-seq of G8: Shoot
SAMC351308	NGS of G8: whole genome
SAMC351307	RNA-seq of G630: Root
SAMC351306	RNA-seq of G630: Shoot
SAMC351305	NGS of G630: whole genome
SAMC351304	RNA-seq of G46: Root
SAMC351303	RNA-seq of G46: Shoot
SAMC351302	NGS of G46: whole genome
SAMC351301	RNA-seq of FS32: Root
SAMC351300	RNA-seq of FS32: Shoot
SAMC351299	NGS of FS32: whole genome
SAMC351298	RNA-seq of FH838: Root
SAMC351297	RNA-seq of FH838: Shoot
SAMC351296	NGS of FH838: whole genome
SAMC351295	RNA-seq of DHX2: Root
SAMC351294	RNA-seq of DHX2: Shoot
SAMC351293	NGS of DHX2: whole genome
SAMC351292	RNA-seq of DG: Root
SAMC351291	RNA-seq of DG: Shoot
SAMC351290	NGS of DG: whole genome
SAMC351289	RNA-seq of D62: Root
SAMC351288	RNA-seq of D62: Shoot
SAMC351287	NGS of D62: whole genome
SAMC351286	RNA-seq of CN1: Root
SAMC351285	RNA-seq of CN1: Shoot
SAMC351284	NGS of CN1: whole genome
SAMC351283	RNA-seq of CG14: Root
SAMC351282	RNA-seq of CG14: Shoot
SAMC351281	NGS of CG14: whole genome
SAMC351280	RNA-seq of Basmati1: Root
SAMC351279	RNA-seq of Basmati1: Shoot
SAMC351278	NGS of Basmati1: whole genome
SAMC351277	RNA-seq of 9311: Root
SAMC351276	RNA-seq of 9311: Shoot
SAMC351275	NGS of 9311: whole genome
SAMC351274	RNA-seq of 02428: Root
SAMC351273	RNA-seq of 02428: Shoot
SAMC351272	NGS of 02428: whole genome
SAMC351271	RNA-seq of KY131: Root
SAMC351270	RNA-seq of KY131: Shoot
SAMC351269	NGS of KY131: whole genome
GSA (1)	-
CRA004087	33 Rice Genomes