| 项目编号 |
PRJCA002191 |
| 项目标题 |
Genome sequencing of Thinopyrum elongatum |
| 涉及领域 |
Agricultural |
| 数据类型 |
Whole genome sequencing
Genome sequencing and assembly
Genome sequencing
Assembly
|
| 物种名称 |
Thinopyrum elongatum
|
| 描述信息 |
Thinopyrum elongatum (syn. Agropyron elongatum or Lophopyrum elongatum) is a grass of the Triticeae family with a diploid E genome (2n = 2X = 14) that is native to Eurasia and which is thought to be the basic genome donor for various tetra-, hexa-, and even deca-ploid species in the Thinopyrum genus. We sequenced and assembled the genome of T. elongatum using a combination of technologies, which resulted in a 4.63 Gb assembly with a contig N50 size of 2.15 Mb and a scaffold N50 size of 73.24 Mb. A total of 141 scaffolds were anchored and oriented onto 7 pseudo-chromosomes, which account for 96% of the estimated genome size (4.78 Gb,) and 98% of the assembled genome sequences. |
| 样品范围 |
Monoisolate |
| 发布日期 |
2020-03-02 |
| 项目资金来源 |
| 机构 |
项目类型 |
授权项目ID |
授权项目名称 |
| National Natural Science Foundation of China (NSFC)
|
|
31520103911
|
|
| National Natural Science Foundation of China (NSFC)
|
|
31871610
|
|
| National Natural Science Foundation of China (NSFC)
|
|
31901492
|
|
| Ministry of Science and Technology of the People
|
|
2016YFD0100102
|
|
| National Key Program on Transgenic Research from the Ministry of Agriculture of China
|
|
2016ZX08002003
|
|
| National Key Program on Transgenic Research from the Ministry of Agriculture of China
|
|
2016ZX08009
|
|
| Agricultural Variety Improvement Project of Shandong Province Grant
|
|
2019LZGC016
|
|
|
|
| 本项目在其他数据库系统中的项目序列号 |
| 项目序列号 |
数据库名称 |
| PRJNA540081
|
NCBI
|
|
|
| 提交者 |
Silong
Sun (sunsl@sdau.edu.cn)
|
| 提交单位 |
Shandong Agricultural University |
| 提交日期 |
2020-02-04 |
