Accession

PRJCA002202

Title

2019 novel coronavirus (nCov)

Relevance

Medical

Data types

Transcriptome or Gene expression

Organisms

Severe acute respiratory syndrome coronavirus 2
Bacteria

Description

2019 novel coronavirus RNA-seq sequences mapped to reference genome MN908947.3, to detect variants.

Sample scope

Bronchoalveolar lavage fluid

Release date

2020-03-26

Publication

PubMed ID	Article title	Journal name	DOI	Year
32129843	Genomic Diversity of Severe Acute Respiratory Syndrome-Coronavirus 2 in Patients With Coronavirus Disease 2019	Clinical Infectious Diseases	10.1093/cid/ciaa203	2020

Grants

Agency	program	Grant ID	Grant title
No funding support

Submitter

Lili Ren (renliliipb@163.com)

Organization

Institute of pathogen Biology

Submission date

2020-02-10

Project Data

Resource name	Description
BioSample (57) show	-
SAMC149809	Negative control
SAMC149808	Negative control
SAMC149807	Negative control
SAMC149806	Negative control
SAMC149805	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149804	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149803	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149802	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149801	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149800	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149799	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149798	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149797	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149796	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149795	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149794	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149793	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149792	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149791	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149790	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149789	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149788	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149787	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149786	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149785	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149784	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149783	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149782	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149781	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149780	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149779	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149778	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149777	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149776	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149775	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149774	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149773	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149772	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149771	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149770	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149769	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149768	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149767	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149766	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149765	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149764	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149763	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149762	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC149761	RNA-seq of community-acquired pneumonia in BALF after removing host reads
SAMC134556	nCov8
SAMC134555	nCov7
SAMC134554	nCov6
SAMC134553	nCov5
SAMC134552	nCov4
SAMC134551	nCov3
SAMC134550	nCov2
SAMC134549	nCov1
GSA (3)	-
CRA002476	RNA-seq of community-acquired pneumonia in BALF
CRA002475	2019 novel coronavirus(nCoV)
CRA002334	2019 novel coronavirus(nCoV)