Accession PRJCA002244
Title single-cell RNA sequencing of zebrafish whole brain
Relevance Model organism
Data types Whole genome sequencing
Raw sequence reads
Genome sequencing
Organisms Danio rerio
Description We apply single-cell RNA-sequencing for larval zebrafish brain, which contain whole brain sample, cells from four major brain region and neuromodulators and neurotranmitter-defined cell population from transgenic fishline.
Sample scope Multiisolate
Release date 2021-12-08
Publication
PubMed ID Article title Journal name DOI Year
34895465 The landscape of regulatory genes in brain-wide neuronal phenotypes of a vertebrate brain eLife 10.7554/eLife.68224 2021
Grants
Agency program Grant ID Grant title
Chinese Academy of Sciences (CAS) Strategic Priority Research Program of Chinese Academy of Sciences (CAS) XDB32000000
Shanghai Municipal Science and Technology Major Project 2018SHZDZX05
State Key Laboratory of Neuroscience, Shanghai Basic Research Field Project 18JC1410100
Submitter hui Zhang (hzhang@ion.ac.cn)
Organization Institute of Neuroscience, Chinese Academy of Science
Submission date 2020-02-21

Project Data

Resource name Description
BioSample (5) -
SAMC136629 vglut2a_2
SAMC136628 vglut2a_1
SAMC136627 vachta
SAMC136626 round2_OB_TeO_subTeO_Hind_2Vmat
SAMC136625 round1_4whole_OB_TeO_subTeO_Hind
GSA (1) -
CRA002361 single-cell RNA sequencing of zebrafish whole brain