项目编号 PRJCA002292
项目标题 Gene and genome evolution across the phylogeny of Bombus
涉及领域 Evolution
数据类型 Whole genome sequencing
Transcriptome or Gene expression
Genome sequencing and assembly
Raw sequence reads
Assembly
物种名称 Bombus haemorrhoidalis
Bombus skorikovi
Bombus confusus
Bombus turneri
Bombus ignitus
Bombus soroeensis
Bombus polaris
Bombus waltoni
Bombus difficillimus
Bombus cullumanus
Bombus picipes
Bombus opulentus
Bombus consobrinus
Bombus sibiricus
Bombus breviceps
Bombus pyrosoma
Bombus superbus
描述信息 We performed de novo sequencing and assembly of the genomes and transcriptomes of 17 bumblebee species, representing all of the 15 subgenera within the genus Bombus. Then, we did comparative analysis on genome structure, genome content, and gene evolutionary dynamics across the phylogeny of Bombus to infer how bumblebee genes and genomes evolve and how they vary in species traits.
样品范围 Multispecies
发布日期 2020-09-21
出版信息
PubMed ID 文章标题 杂志名称 Doi 发表年份
32946576 Genus-Wide Characterization of Bumblebee Genomes Provides Insights into Their Evolution and Variation in Ecological and Behavioral Traits Molecular Biology and Evolution 10.1093/molbev/msaa240 2020
34821764 Genus-Wide Characterization of Nuclear Mitochondrial DNAs in Bumblebee (Hymenoptera: Apidae) Genomes Insects 10.3390/insects12110963 2021
项目资金来源
机构 项目类型 授权项目ID 授权项目名称
National Natural Science Foundation of China (NSFC) General Program 31971397
the Fundamental Research Funds for Central Non-profit Scientific Institution Y2019XK13
提交者 Cheng Sun (suncheng@caas.cn)
提交单位 Chinese Academy of Agricultural Sciences
提交日期 2019-06-21

项目包含数据信息

资源名称 描述
BioSample (36)  show -
GSA (3) -
CRA002416 Whole genome shotgun data for 17 bumblebee species
CRA002439 The RNA-seq data for 14 bumblebees
CRA002452 HiC sequencing data for 5 bumblebees