Accession PRJCA002326
Title Transcriptome of patients infected with SARS-CoV-2
Relevance Medical
Data types Transcriptome or Gene expression
Raw sequence reads
Organisms Homo sapiens
Description RNA-seq was employed to investigate host responses to SARS-CoV-2 infection in the bronchoalveolar lavage fluid (BALF) and peripheral blood mononuclear cells (PBMC) samples of COVID-19 patients.
Sample scope Multiisolate
Release date 2020-04-01
Publication
PubMed ID Article title Journal name DOI Year
32228226 Transcriptomic characteristics of bronchoalveolar lavage fluid and peripheral blood mononuclear cells in COVID-19 patients Emerging Microbes & Infections 10.1080/22221751.2020.1747363 2020
33918313 A COVID-19 Drug Repurposing Strategy through Quantitative Homological Similarities Using a Topological Data Analysis-Based Framework Pharmaceutics 10.3390/pharmaceutics13040488 2021
33782412 Comprehensive transcriptomic analysis of COVID-19 blood, lung, and airway Scientific Reports 10.1038/s41598-021-86002-x 2021
34200572 Identification of Lung and Blood Microbiota Implicated in COVID-19 Prognosis Cells 10.3390/cells10061452 2021
33602138 SARS-CoV-2 early infection signature identified potential key infection mechanisms and drug targets BMC Genomics 10.1186/s12864-021-07433-4 2021
34366686 Integrated multi-omics approach identified molecular mechanism and pathogenetic processes of COVID-19 that affect patient with Parkinson's disorder Saudi Journal of Biological Sciences 10.1016/j.sjbs.2021.07.074 2021
32945352 Transcriptomic analysis of COVID‑19 lungs and bronchoalveolar lavage fluid samples reveals predominant B cell activation responses to infection International Journal of Molecular Medicine 10.3892/ijmm.2020.4702 2020
32736569 A modular framework for the development of targeted Covid-19 blood transcript profiling panels Journal of Translational Medicine 10.1186/s12967-020-02456-z 2020
33521209 Immune characteristics analysis reveals two key inflammatory factors correlated to the expressions of SARS-CoV-2 S1-specific antibodies Genes & Diseases 10.1016/j.gendis.2020.12.007 2022
Data provider
Data provider Data provider URL
Yu Chen http://klv.whu.edu.cn/
Ke Lan http://klv.whu.edu.cn/
Biomaterial provider Yong Xiong
Grants
Agency program Grant ID Grant title
Wuhan University Special Fund for COVID-19 Research N/A
Ministry of Science and Technology of the People's Republic of China (MOST) National Science and Technology Major Project 2018ZX10733403
Submitter Yu    Zhou  (yu.zhou@whu.edu.cn)
Organization Wuhan University
Submission date 2020-03-04

Project Data

Resource name Description
BioSample (10)  show -
GSA (1) -
CRA002390 Transcriptome of patients infected with SARS-CoV-2