Accession PRJCA002369
Title Pacbio full-length transcriptome of Cardamine violifolia
Relevance Agricultural
Data types Transcriptome or Gene expression
Raw sequence reads
Organisms Cardamine circaeoides
Description Cardamine violifolia seedlings were treated by different concentrations of selenate (0, 0.25, 4.0, 16.0 mg/L) and RNAs were extracted from each group. Equal amount of RNAs from each treatment group were mixed to utilize for constructing a Pacbio full-length transcriptome library.
Sample scope Synthetic
Release date 2020-03-12
Publication
PubMed ID Article title Journal name DOI Year
33109081 Integration analysis of PacBio SMRT- and Illumina RNA-seq reveals candidate genes and pathway involved in selenium metabolism in hyperaccumulator Cardamine violifolia BMC Plant Biology 10.1186/s12870-020-02694-9 2020
Grants
Agency program Grant ID Grant title
Science and Technology Department of Hubei Province the Special Projects for Technological Innovation in Hubei Province 2019ABA113
Submitter Shen    Rao  (raoshen1989@163.com)
Organization Yangtze University
Submission date 2020-03-12

Project Data

Resource name Description
BioSample (1) -
SAMC144384 Cardamine FL transcriptome
GSA (1) -
CRA002432 Pacbio full-length transcriptome of Cardamine violifolia