Accession PRJCA002402
Title Whole-genome sequencing of brown-marbled grouper (Epinephelus fuscoguttatus)
Relevance Agricultural
Data types Whole genome sequencing
Organisms Epinephelus fuscoguttatus
Description Brown-marbled grouper (Epinephelus fuscoguttatus) belongs to Epinephelus of Epinephelidae family, which is an important fish species for coral reef ecosystem and marine aquaculture industry. Brown-marbled grouper is the most important female parent in cross breeding of grouper due to its stable and long spawn period and excellent stress tolerance. In the study, a high quality chromosome-level genome of brown-marbled grouper was assembled using Oxford Nanopore technology and Hi-C technology.
Sample scope Monoisolate
Release date 2020-03-18
Publication
PubMed ID Article title Journal name DOI Year
34455708 Whole-genome sequencing of brown-marbled grouper (Epinephelus fuscoguttatus) provides insights into adaptive evolution and growth differences Molecular Ecology Resources 10.1111/1755-0998.13494 2021
Grants
Agency program Grant ID Grant title
Agriculture Research System of China ARS47
Science and Technology Planning Project of Guangzhou 201804020013
Submitter yang    yang  (214453598@qq.com)
Organization Sun Yat-sen University
Submission date 2020-03-18

Project Data

Resource name Description
BioSample (4) -
SAMC353243 Hi-C of brown-marbled grouper
SAMC353242 Illumina of brown-marbled grouper
SAMC353241 RNA-seq of brown-marbled grouper
SAMC149141 Whole-genome sequencing of brown-marbled grouper Epinephelus fuscoguttatus
GSA (4) -
CRA004112 Hi-C raw data of genome of Epinephelus fuscoguttatus
CRA004111 Raw illunima data of genome of Epinephelus fuscoguttatus
CRA004110 RNA-seq of Epinephelus fuscoguttatus for genome annotation
CRA002458 Whole-genome sequencing of brown-marbled grouper (Epinephelus fuscoguttatus)