| Accession |
PRJCA002735 |
| Title |
Nasopharyngeal Swab Metatranscriptomics for identification of SARS-Cov-2 |
| Relevance |
Medical |
| Data types |
Raw sequence reads
|
| Organisms |
Severe acute respiratory syndrome coronavirus 2
|
| Description |
We describe the detection of a SARS-CoV-2 genome through metatranscriptome next-generation sequencing directly from the nasopharyngeal swab of a suspected case of local transmission of Covid-19, in Brazil. Depletion of human ribosomal RNA and use of an optimized, in-house developed, bioinformatics strategy contributed to successful detection of the virus. |
| Sample scope |
Multispecies |
| Release date |
2020-05-25 |
| Grants |
| Agency |
program |
Grant ID |
Grant title |
| No funding support
|
|
|
|
|
|
| Accessions in other database |
| Accession |
Database name |
| PRJNA613951
|
NCBI
|
|
|
| Submitter | This record was originated from NCBI and submitted by NGDC. |
|---|
| Organization |
UFBA |
| Submission date |
2020-05-25 |
