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Accession PRJCA002835
Title Genome-wide re-sequencing data of Brassica napus
Relevance Agricultural
Data types Whole genome sequencing
Raw sequence reads
Organisms Brassica napus
Description Brassica napus (B. napus) produces around 13% of vegetable oil worldwide and it is the largest oil crop in China. Seed oil content (SOC) is a highly important trait for oil crops and breeding oilseeds with high oil content is economically important. Our work generated a large dataset consisting of genomic variations (505 re-sequenced inbreed lines) and transcriptomes of developing seeds (583 RNA-seq in two stages) of a natural population with enormous variation in SOC.
Sample scope Multiisolate
Release date 2021-05-27
Publication
PubMed ID Article title Journal name DOI Year
33309900 Genome- and transcriptome-wide association studies provide insights into the genetic basis of natural variation of seed oil content in Brassica napus Molecular plant 10.1016/j.molp.2020.12.003 2021
36345039 Comprehensive transcriptional variability analysis reveals gene networks regulating seed oil content of Brassica napus Genome Biology 10.1186/s13059-022-02801-z 2022
Linkage and association mapping of ovule number per ovary (ON) in oilseed rape (Brassica napus L.) Research Square 10.21203/rs.3.rs-2149909/v1 2022
37337206 Characterization of novel loci controlling seed oil content in Brassica napus by marker metabolite-based multi-omics analysis Genome Biology 10.1186/s13059-023-02984-z 2023
37521313 Genome-wide association study reveals candidate genes controlling root system architecture under low phosphorus supply at seedling stage in Brassica napus Molecular Breeding 10.1007/s11032-023-01411-2 2023
Grants
Agency program Grant ID Grant title
National Natural Science Foundation of China (NSFC) Key Program 2017YFE0104800
National Natural Science Foundation of China (NSFC) Key Program 2016YFD0101000
National Natural Science Foundation of China (NSFC) General Program 31871658
National Natural Science Foundation of China (NSFC) General Program 31570808
Submitter Hu Zhao (zhaohu44@gmail.com)
Organization Huazhong Agricultural University
Submission date 2020-06-11

Project Data

Resource name Description
BioSample (505)  show -
GSA (1) -
CRA002797 Genome-wide resequencing data of Brassica napus
Related Projects
Projects (1)