Accession

PRJCA003224

Title

Molecular profiling of human non-small-cell lung cancer by single-cell RNA-seq

Relevance

Medical

Data types

Whole genome sequencing

Organisms

Homo sapiens

Description

Lung cancer is one of the malignant tumors with the highest morbidity and mortality worldwide. To comprehensively analyze the molecular heterogeneity of non-small-cell lung cancer (NSCLC), we performed high-precision single-cell RNA-seq analyses on 7,364 individual cells from tumor tissues and matched normal tissues from 19 primary lung cancer patients and 1 pulmonary chondroid hamartoma patient.

Sample scope

Multiisolate

Release date

2022-05-26

Grants

Agency	program	Grant ID	Grant title
Beijing Advanced Innovation Center for Genomics		N/A
National Natural Sciences Foundation Key Program		8163007

Submitter

Fuchou Tang (tangfuchou@pku.edu.cn)

Organization

Peking University

Submission date

2020-08-10

Project Data

Resource name	Description
BioSample (156) show	-
SAMC1404275	patient 27 tumor tissue and adjacent normal tissue region 1
SAMC1404272	patient 26 tumor tissue and adjacent normal tissue region 2
SAMC1404268	patient 26 adjacent normal tissue region 1
SAMC1404264	patient 25 tumor tissue
SAMC1404259	patient 25 adjacent normal tissue region 1 and region 2
SAMC1404255	patient 20 tumor tissue
SAMC1404250	patient 20 adjacent normal tissue region 2
SAMC1404244	patient 20 adjacent normal tissue region 1
SAMC1404241	patient 20 tumor tissue
SAMC1404237	patient 20 adjacent normal tissue region 2
SAMC1404232	patient 20 adjacent normal tissue region 1
SAMC1404228	patient 17 tumor tissue
SAMC1404224	patient 17 adjacent normal tissue region 2
SAMC1404221	patient 17 adjacent normal tissue region 2
SAMC1404219	patient 17 adjacent normal tissue region 1
SAMC1404216	patient 16 normal tissue region1 and region 2
SAMC1404212	patient 16 normal tissue region 1
SAMC1404206	patient 16 normal tissue region 1
SAMC1404203	patient 3 adjacent normal tissue
SAMC1404199	patient 3 adjacent normal tissue
SAMC1404195	patient 3 tumor tissue region 1 and region 2
SAMC1404193	patient 3 tumor tissue region 1 and region 2
SAMC1404188	patient 3 tumor tissue region 2
SAMC1404185	patient 3 tumor tissue region 1
SAMC1404181	patient 22 adjacent normal tissue region 2
SAMC1404177	patient 22 tumor tissue
SAMC1404173	patient 22 adjacent normal tissue region 2
SAMC1404169	patient 22 adjacent normal tissue region 1
SAMC1404166	patient 22 adjacent normal tissue region 1
SAMC1404163	patient 19 adjacent normal tissue region 3
SAMC1404159	patient 19 adjacent normal tissue region 1
SAMC1404154	patient 19 tumor tissue
SAMC1404151	patient 19 adjacent normal tissue region 2
SAMC1404146	patient 19 adjacent normal tissue region 1
SAMC1404143	patient 15 tumor tissue region 3
SAMC1404139	patient 15 tumor tissue region 2
SAMC1404136	patient 15 adjacent normal tissue
SAMC1404132	patient 15 lymphatic metastasis tissue
SAMC1404128	patient 15 lymphatic metastasis tissue
SAMC1404124	patient 15 tumor tissue region 2
SAMC1404120	patient 15 tumor tissue region 1
SAMC1404117	patient 15 tumor tissue region 1
SAMC1404113	patient 13 adjacent normal tissue
SAMC1404109	patient 13 adjacent normal tissue
SAMC1404105	patient 13 second tumor tissue region 3
SAMC1404102	patient 13 second tumor tissue region 2
SAMC1404097	patient 13 second tumor tissue region 1
SAMC1404093	patient 13 first tumor tissue
SAMC1404089	patient 12 tumor tissue region 1 and adjacent normal tissue
SAMC1404087	patient 12 tumor tissue region 2
SAMC1404083	patient 12 tumor tissue region 1
SAMC1404079	patient 12 lymphoid tissue
SAMC1404073	patient 11 tumor tissue region 1
SAMC1404070	patient 11 adjacent normal tissue
SAMC1404065	patient 11 adjacent normal tissue
SAMC1404062	patient 11 tumor tissue region 1
SAMC1404058	patient 11 tumor tissue region 3
SAMC1404054	patient 11 tumor tissue region 2
SAMC1404050	patient 11 tumor tissue region 1
SAMC1404046	patient 10 adjacent normal tissue
SAMC1404042	patient 10 adjacent normal tissue
SAMC1404040	patient 10 tumor tissue region 3
SAMC1404036	patient 10 tumor tissue region 2
SAMC1404031	patient 10 tumor tissue region 1
SAMC1404027	patient 10 tumor tissue region 1
SAMC1404024	patient 9 lymphoid tissue
SAMC1404020	patient 9 lymphoid tissue
SAMC1404016	patient 9 lymphoid tissue
SAMC1404012	patient 9 lymphoid tissue
SAMC1404009	patient 9 lymphoid tissue
SAMC1404005	patient 9 tumor tissue region 4
SAMC1403999	patient 9 tumor tissue region 3
SAMC1403996	patient 9 tumor tissue region 2
SAMC1403992	patient 9 tumor tissue region 1
SAMC1403988	patient 9 adjacent normal tissue
SAMC1403985	patient 9 adjacent normal tissue
SAMC1403982	patient 6 tumor tissue region 3
SAMC1403978	patient 6 adjacent normal tissue
SAMC1403971	patient 6 tumor tissue region 3 and adjacent normal tissue
SAMC1403968	patient 6 tumor tissue region 1 and region 3
SAMC1403964	patient 6 tumor tissue region 2
SAMC1403960	patient 6 tumor tissue region 2
SAMC1403956	patient 6 tumor tissue region 1
SAMC1403953	patient 6 tumor tissue region 1
SAMC1403949	patient 5 tumor tissue region 3 and adjacent normal tissue
SAMC1403945	patient 5 tumor tissue region 1 and region 2
SAMC1403941	patient 5 adjacent normal tissue
SAMC1403937	patient 5 tumor tissue region 3
SAMC1403932	patient 5 tumor tissue region 2
SAMC1403929	patient 5 tumor tissue region 1
SAMC1403924	patient 4 tumor tissue region 3 and adjacent normal tissue
SAMC1403921	patient 4 tumor tissue region 1 and region 2
SAMC1403917	patient 4 adjacent normal tissue
SAMC1403913	patient 4 tumor tissue region 3
SAMC1403910	patient 4 tumor tissue region 2
SAMC1403904	patient 4 tumor tissue region 1
SAMC1403899	patient 2 tumor tissue region 2 and adjacent normal tissue
SAMC1403895	patient 2 tumor tissue region 2
SAMC1403892	patient 2 tumor tissue region 2
SAMC1403889	patient 2 tumor tissue region 1
SAMC1403885	patient 2 tumor tissue and adjacent normal tissue
SAMC1403882	patient 1 tumor tissue and adjacent normal tissue
SAMC1403878	patient 1 tumor tissue
SAMC1403874	patient 1 tumor tissue
SAMC1403871	patient 1 tumor tissue
SAMC1403866	patient 1 tumor tissue and adjacent normal tissue
SAMC1403862	primary tumor
SAMC1403858	adjacent normal tissue region 2
SAMC1403854	adjacent normal tissue region 1
SAMC1403851	primary tumor
SAMC1403848	adjacent normal tissue region 3
SAMC1403845	adjacent normal tissue region 2
SAMC1403841	adjacent normal tissue region 1
SAMC1403837	primary tumor region 5
SAMC1403833	primary tumor region 4
SAMC1403829	primary tumor region 3
SAMC1403825	primary tumor region 2
SAMC1403821	primary tumor region 1
SAMC1403818	adjacent normal tissue
SAMC1403814	Lymph node tissue
SAMC1403811	primary tumor region 3
SAMC1403807	primary tumor region 2
SAMC1403803	primary tumor region 1
SAMC1403799	adjacent normal tissue
SAMC1403796	primary tumor region 2
SAMC1403792	primary tumor region 1
SAMC1403788	adjacent normal tissue
SAMC1403784	Lymph node tissue
SAMC1403780	primary tumor region 2
SAMC1403776	primary tumor region 1
SAMC1403773	adjacent normal tissue
SAMC1403769	primary tumor region 2
SAMC1403764	primary tumor region 1
SAMC1403760	adjacent normal tissue
SAMC1403757	primary tumor region 4
SAMC1403752	primary tumor region 3
SAMC1403748	primary tumor region 2
SAMC1403744	primary tumor region 1
SAMC1403740	Lymph node tissue
SAMC1403737	Lymph node tissue
SAMC1403733	Lymph node tissue
SAMC1403728	primary tumor region 2
SAMC1403724	adjacent normal tissue
SAMC1403720	primary tumor region 3
SAMC1403716	primary tumor region 2
SAMC1403712	primary tumor region 1
SAMC1403709	primary tumor region 3
SAMC1403703	primary tumor region 2
SAMC1403699	primary tumor region 1
SAMC1403694	adjacent normal tissue
SAMC1403690	primary tumor region 2
SAMC1403686	primary tumor region 1
SAMC1403681	primary tumor region 3
SAMC1403679	primary tumor region 2
SAMC1403674	primary tumor region 1
SAMC1403670	adjacent normal tissue