Accession PRJCA003456
Title RNA-Seq and ChIP-Seq of FOXO1 overexpressed in Hepg2 Cells
Relevance Medical
Data types Transcriptome or Gene expression
Organisms Homo sapiens
Description ChIP-Seq analysis was employed to test whether that transcription factor FOXO1 directly regulates CPEB3 transcription in HepG2 cells. Immunoprecipitated DNA was used to construct sequencing libraries following the protocol provided by the I NEXTFLEX ChIP-Seq Library Prep Kit for Illumina Sequencing (NOVA-514120, Bioo Scientific) and sequenced on Illumina Xten with PE 150 method. RNA-Seq data (PE150) of FOXO1 overexpressed in HepG2 cells have carried out via Illumina NovaSeq6000 platform by HaploX Genomics Center (Jiangxi, China).
Sample scope Multiisolate
Release date 2021-11-25
Publication
PubMed ID Article title Journal name DOI Year
35805200 A miR-9-5p/FOXO1/CPEB3 Feed-Forward Loop Drives the Progression of Hepatocellular Carcinoma Cells 10.3390/cells11132116 2022
Grants
Agency program Grant ID Grant title
National Natural Science Foundation of China (NSFC) N/A
Submitter Hui    Hu  (huhui@hust.edu.cn)
Organization Huazhong University of Science and Technology
Submission date 2020-09-14

Project Data

Resource name Description
BioSample (4) -
SAMC239100 HepG2_IN_FOXO1
SAMC239099 HepG2_IP_FOXO1
SAMC239098 HepG2_NC
SAMC239097 HepG2_FOXO1
GSA (1) -
CRA003225 RNA-Seq and ChIP-Seq of FOXO1 overexpressed in HepG2 Cells