Accession

PRJCA003812

Title

The 3D genome of primary and metastatic colorectal cancer

Relevance

Medical

Data types

Epigenomics
Transcriptome or Gene expression
Raw sequence reads
Assembly

Organisms

Homo sapiens

Description

Collected 13 samples of colorectal cancer patients, obtained expression profile, chromatin accessibility, and three-dimensional structure information of chromatin, and carried out integrated analysis.

Sample scope

Multiisolate

Release date

2020-11-02

Biomaterial provider

Jin Gu

Grants

Agency	program	Grant ID	Grant title
National Natural Science Foundation of China (NSFC)	General Program	31871266

Submitter

cheng li (cheng_li@pku.edu.cn)

Organization

Peking University

Submission date

2020-11-02

Project Data

Resource name	Description
BioSample (79) show	-
SAMC1533862	Liver metastasis sample of patient number 14
SAMC1533858	Liver metastasis sample of patient number 14
SAMC1533853	Liver metastasis sample of patient number 14
SAMC1533848	Liver metastasis sample of patient number 14
SAMC1533843	Colorectal primary tumor sample of patient number 14
SAMC1533838	Colorectal primary tumor sample of patient number 14
SAMC1533834	Colorectal primary tumor sample of patient number 14
SAMC1533830	Colorectal primary tumor sample of patient number 14
SAMC1533825	Normal colorectum sample of patient number 14
SAMC1533822	Normal colorectum sample of patient number 14
SAMC1533818	Normal colorectum sample of patient number 14
SAMC1533813	Normal colorectum sample of patient number 14
SAMC1533810	Liver metastasis sample of patient number 13
SAMC1533808	Colorectal primary tumor sample of patient number 13
SAMC1533804	Normal colorectum sample of patient number 13
SAMC1533800	Colorectal primary tumor sample of patient number 11
SAMC1533797	Normal colorectum sample of patient number 11
SAMC1533792	Colorectal primary tumor sample of patient number 10
SAMC1533788	Colorectal primary tumor sample of patient number 10
SAMC1533784	Normal colorectum sample of patient number 10
SAMC1533781	Normal colorectum sample of patient number 10
SAMC1533776	Colorectal primary tumor sample of patient number 09
SAMC1533772	Normal colorectum sample of patient number 09
SAMC1533768	Colorectal primary tumor sample of patient number 08
SAMC1533764	Normal colorectum sample of patient number 08
SAMC1533760	Colorectal primary tumor sample of patient number 07
SAMC1533755	Colorectal primary tumor sample of patient number 07
SAMC1533750	Colorectal primary tumor sample of patient number 07
SAMC1533745	Colorectal primary tumor sample of patient number 07
SAMC1533742	Normal colorectum sample of patient number 07
SAMC1533737	Normal colorectum sample of patient number 07
SAMC1533733	Normal colorectum sample of patient number 07
SAMC1533729	Colorectal primary tumor sample of patient number 06
SAMC1533726	Colorectal primary tumor sample of patient number 06
SAMC1533722	Normal colorectum sample of patient number 06
SAMC1533719	Liver metastasis sample of patient number 05
SAMC1533715	Liver metastasis sample of patient number 05
SAMC1533711	Liver metastasis sample of patient number 05
SAMC1533708	Liver metastasis sample of patient number 05
SAMC1533703	Colorectal primary tumor sample of patient number 05
SAMC1533699	Colorectal primary tumor sample of patient number 05
SAMC1533696	Colorectal primary tumor sample of patient number 05
SAMC1533692	Colorectal primary tumor sample of patient number 05
SAMC1533688	Normal colorectum sample of patient number 05
SAMC1533683	Normal colorectum sample of patient number 05
SAMC1533678	Normal colorectum sample of patient number 05
SAMC1533674	Normal colorectum sample of patient number 05
SAMC1533670	Liver metastasis sample of patient number 04
SAMC1533666	Liver metastasis sample of patient number 04
SAMC1533662	Liver metastasis sample of patient number 04
SAMC1533658	Liver metastasis sample of patient number 04
SAMC1533654	Colorectal primary tumor sample of patient number 04
SAMC1533649	Colorectal primary tumor sample of patient number 04
SAMC1533645	Colorectal primary tumor sample of patient number 04
SAMC1533641	Colorectal primary tumor sample of patient number 04
SAMC1533637	Normal colorectum sample of patient number 04
SAMC1533633	Normal colorectum sample of patient number 04
SAMC1533629	Colorectum sample of patient number 04
SAMC1533625	Colorectum sample of patient number 04
SAMC1533621	Lymph node metastasis sample of patient number 03
SAMC1533618	Lymph node metastasis sample of patient number 03
SAMC1533614	Liver metastasis sample of patient number 03
SAMC1533610	Liver metastasis sample of patient number 03
SAMC1533604	Colorectal primary tumor sample of patient number 03
SAMC1533602	Colorectal primary tumor sample of patient number 03
SAMC1533598	Normal colorectum sample of patient number 03
SAMC1533593	Normal colorectum sample of patient number 03
SAMC1533590	Normal liver sample of patient number 02
SAMC1533587	Normal liver sample of patient number 02
SAMC1533583	Liver metastasis sample of patient number 02
SAMC1533580	Liver metastasis sample of patient number 02
SAMC1533577	Colorectal primary tumor sample of patient number 02
SAMC1533574	Colorectal primary tumor sample of patient number 02
SAMC1533571	Normal colorectum sample of patient number 02
SAMC1533567	Normal colorectum sample of patient number 02
SAMC1533565	Colorectal primary tumor sample of patient number 01
SAMC1533560	Colorectal primary tumor sample of patient number 01
SAMC1533558	Normal colorectum sample of patient number 01
SAMC1533554	Normal colorectum sample of patient number 01