Accession

PRJCA003945

Title

Genomic Profiling of Chinese Urothelial Carcinoma Patients

Relevance

Medical

Data types

Genome sequencing

Organisms

Homo sapiens

Description

Urothelial carcinoma (UC) is the most common genitourinary malignancy in China. In this study, we studied the genomic features in Chinese UC patients and investigated the concordance of genetic alterations between serum circulating tumor-free DNA (ctDNA) and matched tumor tissue. A total of 112 UC patients were enrolled, and 31 of which were upper tract UC (UTUC) and 81 were UC of the bladder (UCB), respectively. Utilizing target next-generation sequencing, we analyzed genomic alterations of 92 selected genes.

Sample scope

Multiisolate

Release date

2020-11-30

Publication

PubMed ID	Article title	Journal name	DOI	Year
33588785	Genomic profiling of Chinese patients with urothelial carcinoma	BMC Cancer	10.1186/s12885-021-07829-1	2021

Grants

Agency	program	Grant ID	Grant title
the Chinese People's Liberation Army General Hospital Medical		2017MBD-012	Chinese People's Liberation Army General Hospital Medical Big Data R&D Project

Submitter

Shunchang Jiao (Jiaoshunchang301@126.com)

Organization

Chinese PLA General Hospital

Submission date

2020-11-30

Project Data

Resource name	Description
BioSample (112) show	-
SAMC1558333	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558329	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558326	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558323	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558319	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558315	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558311	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558306	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558303	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558299	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558296	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558293	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558290	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558286	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558282	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558278	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558275	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558271	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558266	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558263	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558257	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558254	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558250	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558246	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558242	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558239	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558235	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558230	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558224	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558221	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558218	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558214	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558210	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558206	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558201	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558198	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558194	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558190	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558185	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558181	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558176	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558174	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558170	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558166	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558164	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558160	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558156	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558153	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558150	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558146	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558141	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558139	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558135	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558131	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558127	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558122	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558119	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558116	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558112	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558108	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558105	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558099	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558096	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558092	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558088	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558084	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558079	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558077	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558073	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558066	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558062	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558058	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558054	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558051	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558046	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558041	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558036	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558033	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558029	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558024	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558020	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558015	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558012	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558007	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1558003	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1557999	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1557995	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1557991	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1557987	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1557984	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1557978	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1557974	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1557969	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1557966	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1557962	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1557957	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1557954	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1557951	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1557946	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1557941	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1557937	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1557931	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1557927	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1557924	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1557919	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1557913	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1557911	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1557907	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1557903	Blood from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1557899	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1557897	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China
SAMC1557893	FFPE tissue from A chinese urothelithal carcinoma patient enrolled in the Chinese PLA General Hospital, Beijing, China