| Accession |
PRJCA004050 |
| Title |
Surveillance and whole genome sequencing of Human Norovirus and other Foodborne viruses from inbound passengers monitored by Shanghai Customs China during 2018 |
| Relevance |
Medical |
| Data types |
Whole genome sequencing
Genome sequencing and assembly
Raw sequence reads
|
| Organisms |
Norovirus
|
| Description |
Epidemiological investigation was conducted by Shanghai Customs in 2018 according to the passengers self-reported gastrointestinal symptoms. Laboratory-confirmed norovirus-positive samples were further sequenced by NGS aiming at whole viral genome obtaining, laid the foundation for norovirus genotyping, tracking and tracing analyses. Sequences obtained in this study recorded the pattern of norovirus cross-broad transmission, provided more genome information for norovirus database. |
| Sample scope |
clinical samples |
| Release date |
2021-01-01 |
| Publication |
| PubMed ID |
Article title |
Journal name |
DOI |
Year |
| 34271206
|
Imported human norovirus in travelers, Shanghai port, China 2018: An epidemiological and whole genome sequencing study
|
Travel Medicine and Infectious Disease
|
10.1016/j.tmaid.2021.102140
|
2021
|
|
|
| Data provider |
|
| Biomaterial provider |
Shanghai International Travel Healthcare Center, Shanghai Customs District P. R. China |
| Grants |
| Agency |
program |
Grant ID |
Grant title |
| National Science and Technology Major Project
|
|
2018ZX10101003-002
|
|
|
|
| Submitter |
Danlei
Liu (liudanlei@sjtu.edu.cn)
|
| Organization |
shanghai jiaotong university |
| Submission date |
2020-12-16 |
