Accession PRJCA004192
Title Use of Nanopores to Sequence Full-length Transcriptomes of Different Colored Potatoes
Relevance Agricultural
Data types Transcriptome or Gene expression
Organisms Solanum tuberosum
Description The presence of different colors in the plant kingdom has always been a focus of research in the field of plant science. In this study, nanopore sequencing technology was used to perform full-length transcriptome sequencing on the potato varieties Shepody, which has green leaves, and Redr3, which has red leaves. By analyzing and comparing the full-length transcriptome data of two different colored potato varieties, a total of 2715 significantly differently expressed genes were found.
Sample scope Multiisolate
Release date 2021-06-18
Publication
PubMed ID Article title Journal name DOI Year
35508980 Anthocyanin regulatory networks in Solanum tuberosum L. leaves elucidated via integrated metabolomics, transcriptomics, and StAN1 overexpression BMC Plant Biology 10.1186/s12870-022-03557-1 2022
Grants
Agency program Grant ID Grant title
Ministry of Science and Technology of the People's Republic of China (MOST) National Key Technologies R&D Program 2018YFD0200800 National Key Research and Development Plan Integration and Demonstration of Reducing Fertilizer and Pesticide Application and Increasing Efficiency Technology for Potato
Submitter Tengkun    Nie  (chinantk@126.com)
Organization Northwest A&F University
Submission date 2021-01-04

Project Data

Resource name Description
BioSample (2) -
SAMC306448 Redr3_potato
SAMC306447 Shepody_potato
GSA (1) -
CRA003703 Use of Nanopores to Sequence Full-length Transcriptomes of Different Colored Potatoes and Study the Function of stAN1n