| Accession |
PRJCA005308 |
| Title |
An integrated reference genome of G. hirsutum acc. TM-1 |
| Relevance |
Agricultural |
| Data types |
Whole genome sequencing
|
| Organisms |
Gossypium hirsutum
|
| Description |
The multiple assemblies released for the genetic standard TM-1 have made it difficult for cotton biology researchers to choose a reference genome. Here, we report a unified, high-quality, single genome assembly for TM-1 using PacBio long reads and integrating all five published TM-1 genomes. The updated genome shows considerable improvements in completeness, gene annotation, and gap closing. The integrated assemblies were further annotated and the one-to-one correspondence of protein coding genes identified. This new reference genome thus provides a valuable resource for genomic-based studies in cotton. |
| Sample scope |
Monoisolate |
| Release date |
2021-06-07 |
| Grants |
| Agency |
program |
Grant ID |
Grant title |
| National Natural Science Foundation of China (NSFC)
|
|
31822036
|
|
| Leading Innovative and Entrepreneur Team Introduction Program of Zhejiang
|
|
2019R01002
|
|
| Fundamental Research Funds for the Central Universities
|
|
2020XZZX004-03
|
|
|
|
| Accessions in other database |
| Accession |
Database name |
| PRJNA718177
|
NCBI
|
|
|
| Submitter |
jinmin
lian (lianjinmin@biozeron.com)
|
| Organization |
Biozeron Shenzhen, Inc |
| Submission date |
2021-05-29 |
