Accession PRJCA005531
Title Rapid identification of QTL for mesocotyl length in rice through combining QTL-seq and genome-wide association analysis
Relevance Agricultural
Data types Whole genome sequencing
Organisms Oryza sativa
Description Mesocotyl is a crucial organ for pushing buds out of soil, which plays a vital role in seedling emergence and establishment in direct-seeded rice. Thus, identification of quantitative trait loci (QTL) associated with mesocotyl length (ML) could accelerate genetic improvement of rice for direct-seeding cultivation. In this study, QTL-seq applied to 12 F2 populations identified 14 QTL for ML, which were distributed on chromosome 1, 3, 4, 5, 6, 7 and 9 based on Δ(SNP-index) or G-value statistics. These data include the IR145, all the short and long pool of 12 F2 populations.
Sample scope Multiisolate
Release date 2021-07-01
Grants
Agency program Grant ID Grant title
Postdoctoral Science Foundation of China China Postdoctoral Science Foundation 2020M68299
Chinese Academy of Agricultural Sciences (CAAS) Agricultural Science and Technology Innovation Program No
Submitter Yamei    Wang  (wangyamei23@126.com)
Organization Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences
Submission date 2021-06-16

Project Data

Resource name Description
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