| Accession |
PRJCA005541 |
| Title |
Gapless indica rice genome reveals synergistic contributions of active transposable elements and segmental duplications to rice genome evolution |
| Relevance |
Agricultural |
| Data types |
Assembly
|
| Organisms |
Oryza sativa Indica Group
|
| Description |
In this study, we presented a new assembly pipeline to produce a gapless 397.71-Mb genome for the indica rice cultivar Minghui 63, which is composed of 12 contigs with a contig N50 size of 31.93 Mb, and each chromosome is represented by a single contig. Compared with the japonica rice, the indica genome has more transposable elements (TEs) and segmental duplications (SDs), and our findings suggest that active TEs and SDs together provide synergistic effects to promote rice genome evolution. |
| Sample scope |
Monoisolate |
| Release date |
2021-06-21 |
| Grants |
| Agency |
program |
Grant ID |
Grant title |
| National Natural Science Foundation of China
|
|
31770331
|
|
| National Natural Science Foundation of China
|
|
31970318
|
|
|
|
| Submitter |
KUI
LI (likui345@126.com)
|
| Organization |
Nanjing University |
| Submission date |
2021-06-19 |
