项目编号

PRJCA005689

项目标题

SARS-CoV-2 genome sequences related with Guangzhou outbreak on May 21 2021

涉及领域

Medical

数据类型

Whole genome sequencing
Genome sequencing and assembly

物种名称

Severe acute respiratory syndrome coronavirus 2

描述信息

There were 126 high-quality viral genome sequences (Coverage>95%) obtained from this outbreak. The raw sequencing data were mapped to the reference sequence (sequence from the first index case identified on May 21) after quality control.

样品范围

Monoisolate

发布日期

2021-07-02

出版信息

PubMed ID	文章标题	杂志名称	Doi	发表年份
35075154	Viral infection and transmission in a large, well-traced outbreak caused by the SARS-CoV-2 Delta variant	Nature Communications	10.1038/s41467-022-28089-y	2022

项目资金来源

机构	项目类型	授权项目ID	授权项目名称
Chinese Academy of Medical Sciences	Guangdong Workstation for Emerging Infectious Disease Control and Prevention	N/A
Guangdong Science and Technology Agency	The Key Research and Development Program of Guangdong Province	2019B111103001

提交者

Jing Lu (jimlu0331@163.com)

提交单位

Guangdong Provincial Center for Diseases Control and prevention

提交日期

2021-07-01

项目包含数据信息

资源名称	描述
BioSample (126) show	-
SAMC400228	Illumina_6201_GZ_2021/6/3
SAMC400227	Illumina_6486_GZ_2021/6/9
SAMC400226	Illumina_6464_GZ_2021/6/8
SAMC400225	illumina_6186_GZ_2021/6/2
SAMC400224	illumina_6179_GZ_2021/6/2
SAMC400223	Illumina_6573_GZ_2021/6/11
SAMC400222	Illumina_6579_GZ_2021/6/11
SAMC400221	Illumina_6245_GZ_2021/6/5
SAMC400220	Illumina_6196_GZ_2021/6/4
SAMC400219	Illumina_6578_GZ_2021/6/11
SAMC400218	Illumina_5947_GZ_2021/5/29
SAMC400217	Illumina_6483_GZ_2021/6/8
SAMC400216	Illumina_6582_GZ_2021/6/11
SAMC400215	Illumina_6580_GZ_2021/6/11
SAMC400214	Illumina_6244_GZ_2021/6/5
SAMC400213	Illumina_6308_GZ_2021/6/7
SAMC400212	Illumina_6004_GZ_2021/5/31
SAMC400211	Illumina_6703_GZ_2021/6/13
SAMC400210	Illumina_6215_FS_2021/6/3
SAMC400209	Illumina_5989_GZ_2021/5/31
SAMC400208	Illumina_6220_FS_2021/6/4
SAMC400207	Illumina_6055_GZ_2021/5/30
SAMC400206	Illumina_6766_GZ_2021/6/10
SAMC400205	Illumina_5994_GZ_2021/5/31
SAMC400204	Illumina_6367_GZ_2021/5/31
SAMC400203	Illumina_6056_GZ_2021/5/30
SAMC400202	Illumina_5984_GZ_2021/5/29
SAMC400201	Illumina_5992_GZ_2021/5/31
SAMC400200	Illumina_6577_GZ_2021/6/12
SAMC400199	Illumina_6791_GZ_2021/6/12
SAMC400198	Illuminia_6300_GZ_2021/6/7
SAMC400197	Illumina_6555_GZ_2021/6/12
SAMC400196	Illumina_6209_GZ_2021/6/4
SAMC400195	Illumina_6208_GZ_2021/6/4
SAMC400194	Illumina_5975_GZ_2021/5/26
SAMC400193	Illumina_5945_GZ_2021/5/29
SAMC400192	Illumina_6346_GZ_2021/6/7
SAMC400191	illumina_6178_GZ_2021/6/2
SAMC400190	Illumina_6303_GZ_2021/6/6
SAMC400189	Illumina_6341_GZ_2021/6/7
SAMC400188	Illumina_6202_GZ_2021/6/3
SAMC400187	Illumina_6001_GZ_2021/5/31
SAMC400186	Illumina_5648_GZ_2021/5/27
SAMC400185	Illumina_5371_GZ_2021/5/23
SAMC400184	Illumina_6465_GZ_2021/6/8
SAMC400183	Illumina_6794_GZ_2021/6/13
SAMC400182	Illumina_6200_GZ_2021/6/3
SAMC400181	Illumina_6543_GZ_2021/6/10
SAMC400180	Illumina_6003_GZ_2021/5/23
SAMC400179	Illumina_6242_GZ_2021/6/5
SAMC400178	Illumina_6216_FS_2021/6/4
SAMC400177	Illumina_6217_FS_2021/6/4
SAMC400176	Illumina_5647_GZ_2021/5/26
SAMC400175	Illumina_6666_GZ_2021/6/11
SAMC400174	Illumina_6484_GZ_2021/6/10
SAMC400173	Illumina_6292_ZJ_2021/6/6
SAMC400172	Illumina_6342_GZ_2021/6/7
SAMC400171	Illumina_6047_GZ_2021/5/29
SAMC400170	Illumina_5993_GZ_2021/5/31
SAMC400169	Illumina_5952_GZ_2021/5/29
SAMC400168	Illumina_5571_GZ_2021/5/24
SAMC400167	Illumina_6050_GZ_2021/5/29
SAMC400166	BGI_6173_GZ_2021/6/1
SAMC400165	Illumina_6238_GZ_2021/6/5
SAMC400164	BGI_5976_GZ_2021/5/30
SAMC400163	BGI_6172_GZ_2021/6/1
SAMC400162	illumina_6190_GZ_2021/6/2
SAMC400161	BGI_6167_GZ_2021/6/1
SAMC400160	BGI_6168_GZ_2021/6/1
SAMC400159	BGI_5943_GZ_2021/5/29
SAMC400158	BGI_5860_FS_2021/5/28
SAMC400157	BGI_5873_GZ_2021/5/30
SAMC400156	BGI_6175_GZ_2021/6/1
SAMC400155	BGI_6174_GZ_2021/6/1
SAMC400154	BGI_6171_GZ_2021/6/1
SAMC400153	BGI_6166_GZ_2021/6/1
SAMC400152	BGI_6176_GZ_2021/6/1
SAMC400151	BGI_6169_GZ_2021/6/1
SAMC400150	BGI_6165_GZ_2021/6/1
SAMC400149	BGI_5859_FS_2021/5/28
SAMC400148	BGI_5847_GZ_2021/5/28
SAMC400147	BGI_5939_GZ_2021/5/30
SAMC400146	BGI_5931_FS_2021/5/29
SAMC400145	BGI_5869_GZ_2021/5/28
SAMC400144	BGI_5861_FS_2021/5/28
SAMC400143	BGI_5844_FS_2021/5/27
SAMC400142	BGI_5841_GZ_2021/5/27
SAMC400141	illumina_6181_GZ_2021/6/2
SAMC400140	Illumina_6066_GZ_2021/5/30
SAMC400139	BGI_5851_GZ_2021/5/28
SAMC400138	BGI_5843_GZ_2021/5/27
SAMC400137	Illumina_6205_GZ_2021/6/3
SAMC400136	Illumina_5972_FS_2021/5/30
SAMC400135	Illumina_5646_GZ_2021/5/26
SAMC400134	Illumina_5645_GZ_2021/5/26
SAMC400133	Illumina_5137_GZ_2021/5/21
SAMC400132	Illumina_6581_GZ_2021/6/11
SAMC400131	Illumina_6545_GZ_2021/6/10
SAMC400130	Illumina_6546_GZ_2021/6/10
SAMC400129	Illumina_6544_GZ_2021/6/10
SAMC400128	Illumina_6540_GZ_2021/6/10
SAMC400127	Illumina_6547_GZ_2021/6/11
SAMC400126	Illumina_6203_GZ_2021/6/3
SAMC400125	Illumina_5985_GZ_2021/5/30
SAMC400124	Illumina_6305_GZ_2021/6/6
SAMC400123	Illumina_6241_GZ_2021/6/5
SAMC400122	Illumina_6541_GZ_2021/6/10
SAMC400121	Illumina_6240_GZ_2021/6/5
SAMC400120	Illumina_6338_GZ_2021/6/9
SAMC400119	Illumina_6542_GZ_2021/6/10
SAMC400118	Illumina_6307_GZ_2021/6/7
SAMC400117	Illumina_6304_GZ_2021/6/6
SAMC400116	Illumina_6306_GZ_2021/6/7
SAMC400115	illumina_6189_GZ_2021/6/2
SAMC400114	illumina_6188_GZ_2021/6/2
SAMC400113	Illumina_6575_GZ_2021/6/11
SAMC400112	Illumina_6212_GZ_2021/6/4
SAMC400111	illumina_6191_GZ_2021/6/2
SAMC400110	Illumina_6051_GZ_2021/5/30
SAMC400109	Illumina_5941_GZ_2021/5/29
SAMC400108	Illumina_5990_GZ_2021/5/31
SAMC400107	Illumina_6239_GZ_2021/6/5
SAMC400106	Illumina_6002_GZ_2021/5/31
SAMC400105	illumina_6184_GZ_2021/6/2
SAMC400104	illumina_6183_GZ_2021/6/2
SAMC400103	Illumina_5986_GZ_2021/5/30
GSA (1)	-
CRA004896	SARS-CoV-2 genome sequences related with Guangzhou outbreak, 2021