项目编号 PRJCA005725
项目标题 Nanopore Targeted Sequencing for the Accurate and Comprehensive Detection of SARS-CoV-2 and Other Respiratory Viruses
涉及领域 Medical
数据类型 Targeted Locus (Loci)
Raw sequence reads
物种名称 Severe acute respiratory syndrome coronavirus 2
blank sample
synthetic construct
mixed sample
描述信息 Nanopore targeted sequencing (NTS) method combines the advantages of target amplification and long-read, real-time sequencing, it can be used to efficiently detect SARS-CoV-2 and other respiratory viruses simultaneously. NTS is thus suitable for contemporary COVID-19 diagnosis; moreover, it can be further extended for diagnosing other viruses or pathogens. The paper was published on Small June 24, 2020, https://doi.org/10.1002/smll.202002169.
样品范围 clinical sample and synthetic gene
发布日期 2021-07-08
出版信息
PubMed ID 文章标题 杂志名称 Doi 发表年份
34398234 Recovery of Deleted Deep Sequencing Data Sheds More Light on the Early Wuhan SARS-CoV-2 Epidemic Molecular Biology and Evolution 10.1093/molbev/msab246 2021
40488574 A Critical Reexamination of Recovered SARS-CoV-2 Sequencing Data Molecular Biology and Evolution 10.1093/molbev/msaf109 2025
35288552 Rescuing low frequency variants within intra-host viral populations directly from Oxford Nanopore sequencing data Nature Communications 10.1038/s41467-022-28852-1 2022
项目资金来源
机构 项目类型 授权项目ID 授权项目名称
Emergency Project of Hubei Province 2020FCA034
Fundamental Research Funds for the Central Universities 2042020kf1003
Ministry of Science and Technology of the People's Republic of China (MOST) 2017YFC0908405
National Natural Science Foundation of China (NSFC) 81870187
提交者 Ben Hu (ben_hu@whu.edu.cn)
提交单位 Wuhan University
提交日期 2021-07-05

项目包含数据信息

资源名称 描述
BioSample (241)  show -
GSA (1) -
CRA004499 Nanopore Targeted Sequencing for the Accurate and Comprehensive Detection of SARS-CoV-2 and Other Respiratory Viruses