| Accession |
PRJCA006702 |
| Title |
Long-C |
| Relevance |
Agricultural |
| Data types |
Raw sequence reads
|
| Organisms |
Arabidopsis
|
| Description |
Genome architecture is critical for regulating various cellular functions.While plenty of Hi-C datasets with pairwise interaction information exists, characterization of multi-way chromatin interaction is still missing in plant. Here, we developed Long-C in plant , a Nanopore-based method that directly sequences the DNA concatemers generated by proximity-based ligation, to extract higher-order chromosome interaction in Arabidopsis |
| Sample scope |
Monoisolate |
| Release date |
2022-06-22 |
| Publication |
| PubMed ID |
Article title |
Journal name |
DOI |
Year |
| 35313066
|
Pore-C simultaneously captures genome-wide multi-way chromatin interaction and associated DNA methylation status in Arabidopsis
|
Plant Biotechnology Journal
|
10.1111/pbi.13811
|
2022
|
|
|
| Grants |
| Agency |
program |
Grant ID |
Grant title |
| No funding support
|
|
|
|
|
|
| Submitter |
Zhuowen
Li (11930458@mail.sustech.edu.cn)
|
| Organization |
Southern University of Science and Technology |
| Submission date |
2021-09-26 |
