项目编号 PRJCA008088
项目标题 RVFScan predicts virulence factor genes and hypervirulence of clinical metagenome
涉及领域 Medical
数据类型 Whole genome sequencing
Metagenome
物种名称 Acinetobacter baumannii
archaea
Bacteria
Pseudomonas aeruginosa
Klebsiella pneumoniae
Staphylococcus aureus
描述信息 RVFScan can be applied directly to metagenomic reads to detect VFG without assembly and is suitable for low-biomass and high complexity clinical samples. The combination of RVFScan and high-frequency VFG profile of hvKP enables rapid clinical identification and symptomatic treatment of hvKP. This strategy can also be applied to the identification and the clinical anti-infective treatment of other hypervirulent pathogens.
样品范围 Multispecies
发布日期 2022-03-24
出版信息
PubMed ID 文章标题 杂志名称 Doi 发表年份
37930030 RVFScan predicts virulence factor genes and hypervirulence of the clinical metagenome Briefings in Bioinformatics 10.1093/bib/bbad403 2023
项目资金来源
机构 项目类型 授权项目ID 授权项目名称
National Natural Science Foundation of China (NSFC) 82072380
National Natural Science Foundation of China (NSFC) 81871734
National Natural Science Foundation of China (NSFC) 82002236
The Science and Technology Project of Xi'an 21RGSF0013
Guangzhou Young scientific and technological talents support project X20210201063
提交者 Shu Fan (fanshu@hugobiotech.com)
提交单位 Hugobiotech Beijing Co.,Ltd.
提交日期 2022-01-26

项目包含数据信息

资源名称 描述
BioSample (21)  show -
GSA (2) -
CRA005991 RVFScan predicts virulence factor genes and hypervirulence of clinical metagenom
CRA005992 RVFScan predicts virulence factor genes and hypervirulence of clinical metagenome