项目编号 PRJCA009406
项目标题 Phenotypic and Genetic Characterization of hypervirulent Klebsiella pneumoniae in various patients with liver abscess and ventilator-associated severe pneumonia
涉及领域 Medical
数据类型 Whole genome sequencing
Assembly
物种名称 Klebsiella pneumoniae
描述信息 As an important clinical pathogen among Enterobacteriaceae, Klebsiella pneumoniae can cause community and hospital-acquired infections, including Ventilator-associated pneumonia (VAP) and invasive pyogenic liver abscess (PLA) with life-threatening malignant consequences commonly occurring, but the underlying pathogenic mechanisms of these two types of virulent K.pneumoniae strains and their differences have not been detailedly clarified. Here, The clinical data, genome sequencing, antimicrobial resistance (AMR) and virulence profile analysis, the hypermucoviscous phenotype, and core genome multilocus sequence typing (cgMLST) of clinical K. pneumoniae isolates from two groups were comprehensively investigated in this study. We then used the Kleberate tool as a predictive model to effectively screen the key biomarker between the two groups. Through a systematic analytical study, we found only limited differences in the biological characteristics, genome, resistance and virulence profiles, and metabolic pathways between VAP and PLA isolates. In terms of epidemiological results, the PLA group had certain underlying disease preferences, especially diabetes and cholelithiasis. The drug resistance results of VAP were significantly higher than that of PLA, while the virulence comparison was opposite. Kleberate tool could well display the AMR and virulence factors of clinical isolates from two groups. The combination of iucA, rmpA, hypermucoviscous phenotype, and ST23 presented in K. pneumoniae strain infection is of more concern and will be beneficial for timely antibiotic treatment. The study could provide a reference for clinical screening, epidemiological surveillance, optimization of patient care, and reasonable antibacterial therapy.
样品范围 Multiisolate
发布日期 2023-05-01
项目资金来源
机构 项目类型 授权项目ID 授权项目名称
No funding support N/A
提交者 YONGZHANG ZHU (yzhzhu@hotmail.com)
提交单位 Shanghai Jiaotong University School of Medicine
提交日期 2022-05-03

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