Accession PRJCA009494
Title Identification of Genetic Loci and Candidate Genes Responsible for Stalk Sugar Content and Agronomic Traits in Fresh Corn via GWAS
Relevance Agricultural
Data types Phenotype or Genotype
Organisms Zea mays
Description In this study, based on 36,069 high-quality single-nucleotide polymorphisms (SNPs) from 188 sweet, waxy and hybrid corn accessions with relatively great difference in stalk sugar content, 32 genomic regions and 172 genes were detected as being under selection using selective-sweep analysis between sweet and waxy corns. Furthermore, using the agronomic traits and stalk sugar content of 4 environments from 2 years of spring and autumn sowing, the genome-wide association analysis (GWAS) were performed, which identified a total of 92 significant associated SNPs and 37 significant SNPs were simultaneously identified across multiple environments, and the related candidate genes encoding CDPK, MYB, pyruvate dehydrogenase, pectinesterase and so on.
Sample scope Multiisolate
Release date 2022-05-10
Publication
PubMed ID Article title Journal name DOI Year
36362278 Identification of Genetic Variations and Candidate Genes Responsible for Stalk Sugar Content and Agronomic Traits in Fresh Corn via GWAS across Multiple Environments International Journal of Molecular Sciences 10.3390/ijms232113490 2022
Grants
Agency program Grant ID Grant title
No funding support
Submitter jianjian chen (chenjj@zaas.ac.cn)
Organization Zhejiang Academy of Agricultural Sciences
Submission date 2022-05-09

Project Data

Resource name Description