Accession

PRJCA009561

Title

The resequencing data of 215 accessions in Capsicum annuum

Relevance

Agricultural

Data types

Whole genome sequencing

Organisms

Capsicum baccatum
Capsicum frutescens
Capsicum chinense
Capsicum annuum

Description

In this work, we performed whole-genome sequencing of 215 pepper materials from Asia, constructed high-quality SNPs and InDels, completed population structure analysis and PCA analysis, and identified 10 SNPs significantly associated with capsaicin. The study is aimed at elaborating on the evolution of the capsaicin synthesis pathway and the regulatory network of capsaicin synthesis.

Sample scope

Multiisolate

Release date

2023-05-23

Grants

Agency	program	Grant ID	Grant title
Ministry of Science and Technology of the People's Republic of China (MOST)		2018YFD0201200

Submitter

dong xiao li (lxd1997xy@163.com)

Organization

Southwest University

Submission date

2022-05-12

Project Data

Resource name	Description
BioSample (215) show	-
SAMC956037	The whole genome sequencing of pepper: m5A
SAMC956036	The whole genome sequencing of pepper: m3A
SAMC956035	The whole genome sequencing of pepper: X200A
SAMC956034	The whole genome sequencing of pepper: X199A
SAMC956033	The whole genome sequencing of pepper: X198A
SAMC956032	The whole genome sequencing of pepper: X197A
SAMC956031	The whole genome sequencing of pepper: X195A
SAMC956030	The whole genome sequencing of pepper: X193A
SAMC956029	The whole genome sequencing of pepper: X192A
SAMC956028	The whole genome sequencing of pepper: X191A
SAMC956027	The whole genome sequencing of pepper: X190A
SAMC956026	The whole genome sequencing of pepper: X189A
SAMC956025	The whole genome sequencing of pepper: X188A
SAMC956024	The whole genome sequencing of pepper: X187A
SAMC956023	The whole genome sequencing of pepper: X186A
SAMC956022	The whole genome sequencing of pepper: X185A
SAMC956021	The whole genome sequencing of pepper: X184A
SAMC956020	The whole genome sequencing of pepper: X183A
SAMC956019	The whole genome sequencing of pepper: X182A
SAMC956018	The whole genome sequencing of pepper: X181A
SAMC956017	The whole genome sequencing of pepper: X180A
SAMC956016	The whole genome sequencing of pepper: X179A
SAMC956015	The whole genome sequencing of pepper: X178A
SAMC956014	The whole genome sequencing of pepper: X177A
SAMC956013	The whole genome sequencing of pepper: X176A
SAMC956012	The whole genome sequencing of pepper: X175A
SAMC956011	The whole genome sequencing of pepper: X173A
SAMC956010	The whole genome sequencing of pepper: X172A
SAMC956009	The whole genome sequencing of pepper: X171A
SAMC956008	The whole genome sequencing of pepper: X170A
SAMC956007	The whole genome sequencing of pepper: X168A
SAMC956006	The whole genome sequencing of pepper: X166A
SAMC956005	The whole genome sequencing of pepper: X165A
SAMC956004	The whole genome sequencing of pepper: X164A
SAMC956003	The whole genome sequencing of pepper: X163A
SAMC956002	The whole genome sequencing of pepper: X162A
SAMC956001	The whole genome sequencing of pepper: X161A
SAMC956000	The whole genome sequencing of pepper: X160A
SAMC955999	The whole genome sequencing of pepper: X159A
SAMC955998	The whole genome sequencing of pepper: X156A
SAMC955997	The whole genome sequencing of pepper: X155A
SAMC955996	The whole genome sequencing of pepper: X154A
SAMC955995	The whole genome sequencing of pepper: X153A
SAMC955994	The whole genome sequencing of pepper: X152A
SAMC955993	The whole genome sequencing of pepper: X151A
SAMC955992	The whole genome sequencing of pepper: N8A
SAMC955991	The whole genome sequencing of pepper: N7A
SAMC955990	The whole genome sequencing of pepper: N6A
SAMC955989	The whole genome sequencing of pepper: N5A
SAMC955988	The whole genome sequencing of pepper: N4A
SAMC955987	The whole genome sequencing of pepper: N43A
SAMC955986	The whole genome sequencing of pepper: N42A
SAMC955985	The whole genome sequencing of pepper: N3A
SAMC955984	The whole genome sequencing of pepper: N33A
SAMC955983	The whole genome sequencing of pepper: N32A
SAMC955982	The whole genome sequencing of pepper: N31A
SAMC955981	The whole genome sequencing of pepper: N30A
SAMC955980	The whole genome sequencing of pepper: N29A
SAMC955979	The whole genome sequencing of pepper: N28A
SAMC955978	The whole genome sequencing of pepper: N26A
SAMC955977	The whole genome sequencing of pepper: N25A
SAMC955976	The whole genome sequencing of pepper: N24A
SAMC955975	The whole genome sequencing of pepper: N23A
SAMC955974	The whole genome sequencing of pepper: N22A
SAMC955973	The whole genome sequencing of pepper: N21A
SAMC955972	The whole genome sequencing of pepper: N17A
SAMC955971	The whole genome sequencing of pepper: N16A
SAMC955970	The whole genome sequencing of pepper: N14A
SAMC955969	The whole genome sequencing of pepper: N13A
SAMC955968	The whole genome sequencing of pepper: E48A
SAMC955967	The whole genome sequencing of pepper: E47A
SAMC955966	The whole genome sequencing of pepper: E45A
SAMC955965	The whole genome sequencing of pepper: E44A
SAMC955964	The whole genome sequencing of pepper: E43A
SAMC955963	The whole genome sequencing of pepper: E42A
SAMC955962	The whole genome sequencing of pepper: E41A
SAMC955961	The whole genome sequencing of pepper: E40B
SAMC955960	The whole genome sequencing of pepper: E39A
SAMC955959	The whole genome sequencing of pepper: E38A
SAMC955958	The whole genome sequencing of pepper: E37A
SAMC955957	The whole genome sequencing of pepper: E36A
SAMC955956	The whole genome sequencing of pepper: E35A
SAMC955955	The whole genome sequencing of pepper: E34A
SAMC955954	The whole genome sequencing of pepper: E33B
SAMC955953	The whole genome sequencing of pepper: E32A
SAMC955952	The whole genome sequencing of pepper: E31A
SAMC955951	The whole genome sequencing of pepper: E30A
SAMC955950	The whole genome sequencing of pepper: E29A
SAMC955949	The whole genome sequencing of pepper: E28A
SAMC955948	The whole genome sequencing of pepper: E27A
SAMC955947	The whole genome sequencing of pepper: E25A
SAMC955946	The whole genome sequencing of pepper: E24A
SAMC955945	The whole genome sequencing of pepper: E23A
SAMC955944	The whole genome sequencing of pepper: E22A
SAMC955943	The whole genome sequencing of pepper: E21A
SAMC955942	The whole genome sequencing of pepper: E20A
SAMC955941	The whole genome sequencing of pepper: D9A
SAMC955940	The whole genome sequencing of pepper: D8B
SAMC955939	The whole genome sequencing of pepper: D7B
SAMC955938	The whole genome sequencing of pepper: D5A
SAMC955937	The whole genome sequencing of pepper: D50A
SAMC955936	The whole genome sequencing of pepper: D4A
SAMC955935	The whole genome sequencing of pepper: D49A
SAMC955934	The whole genome sequencing of pepper: D48A
SAMC955933	The whole genome sequencing of pepper: D47A
SAMC955932	The whole genome sequencing of pepper: D46A
SAMC955931	The whole genome sequencing of pepper: D45A
SAMC955930	The whole genome sequencing of pepper: D44A
SAMC955929	The whole genome sequencing of pepper: D43A
SAMC955928	The whole genome sequencing of pepper: D42A
SAMC955927	The whole genome sequencing of pepper: D41A
SAMC955926	The whole genome sequencing of pepper: D40A
SAMC955925	The whole genome sequencing of pepper: D3A
SAMC955924	The whole genome sequencing of pepper: D39A
SAMC955923	The whole genome sequencing of pepper: D38A
SAMC955922	The whole genome sequencing of pepper: D37A
SAMC955921	The whole genome sequencing of pepper: D36A
SAMC955920	The whole genome sequencing of pepper: D35A
SAMC955919	The whole genome sequencing of pepper: D34A
SAMC955918	The whole genome sequencing of pepper: D33A
SAMC955917	The whole genome sequencing of pepper: D32A
SAMC955916	The whole genome sequencing of pepper: D31A
SAMC955915	The whole genome sequencing of pepper: D30A
SAMC955914	The whole genome sequencing of pepper: D29A
SAMC955913	The whole genome sequencing of pepper: D28A
SAMC955912	The whole genome sequencing of pepper: D27A
SAMC955911	The whole genome sequencing of pepper: D26A
SAMC955910	The whole genome sequencing of pepper: D25A
SAMC955909	The whole genome sequencing of pepper: D24A
SAMC955908	The whole genome sequencing of pepper: D23A
SAMC955907	The whole genome sequencing of pepper: D22B
SAMC955906	The whole genome sequencing of pepper: D16A
SAMC955905	The whole genome sequencing of pepper: C9A
SAMC955904	The whole genome sequencing of pepper: C8A
SAMC955903	The whole genome sequencing of pepper: C7A
SAMC955902	The whole genome sequencing of pepper: C6B
SAMC955901	The whole genome sequencing of pepper: C60A
SAMC955900	The whole genome sequencing of pepper: C5A
SAMC955899	The whole genome sequencing of pepper: C59A
SAMC955898	The whole genome sequencing of pepper: C58A
SAMC955897	The whole genome sequencing of pepper: C57A
SAMC955896	The whole genome sequencing of pepper: C56A
SAMC955895	The whole genome sequencing of pepper: C55A
SAMC955894	The whole genome sequencing of pepper: C54A
SAMC955893	The whole genome sequencing of pepper: C53A
SAMC955892	The whole genome sequencing of pepper: C52A
SAMC955891	The whole genome sequencing of pepper: C51A
SAMC955890	The whole genome sequencing of pepper: C4A
SAMC955889	The whole genome sequencing of pepper: C49A
SAMC955888	The whole genome sequencing of pepper: C48A
SAMC955887	The whole genome sequencing of pepper: C46A
SAMC955886	The whole genome sequencing of pepper: C45A
SAMC955885	The whole genome sequencing of pepper: C44A
SAMC955884	The whole genome sequencing of pepper: C43A
SAMC955883	The whole genome sequencing of pepper: C42A
SAMC955882	The whole genome sequencing of pepper: C41A
SAMC955881	The whole genome sequencing of pepper: C40A
SAMC955880	The whole genome sequencing of pepper: C3A
SAMC955879	The whole genome sequencing of pepper: C39A
SAMC955878	The whole genome sequencing of pepper: C38A
SAMC955877	The whole genome sequencing of pepper: C37A
SAMC955876	The whole genome sequencing of pepper: C36A
SAMC955875	The whole genome sequencing of pepper: C35A
SAMC955874	The whole genome sequencing of pepper: C33A
SAMC955873	The whole genome sequencing of pepper: C32A
SAMC955872	The whole genome sequencing of pepper: C31A
SAMC955871	The whole genome sequencing of pepper: C2A
SAMC955870	The whole genome sequencing of pepper: C29A
SAMC955869	The whole genome sequencing of pepper: C28A
SAMC955868	The whole genome sequencing of pepper: C26A
SAMC955867	The whole genome sequencing of pepper: C25A
SAMC955866	The whole genome sequencing of pepper: C23A
SAMC955865	The whole genome sequencing of pepper: C22A
SAMC955864	The whole genome sequencing of pepper: C21A
SAMC955863	The whole genome sequencing of pepper: C20A
SAMC955862	The whole genome sequencing of pepper: C1A
SAMC955861	The whole genome sequencing of pepper: C19B
SAMC955860	The whole genome sequencing of pepper: C18A
SAMC955859	The whole genome sequencing of pepper: C17A
SAMC955858	The whole genome sequencing of pepper: C16A
SAMC955857	The whole genome sequencing of pepper: C15A
SAMC955856	The whole genome sequencing of pepper: C14A
SAMC955855	The whole genome sequencing of pepper: C12A
SAMC955854	The whole genome sequencing of pepper: C11A
SAMC955853	The whole genome sequencing of pepper: C10A
SAMC955852	The whole genome sequencing of pepper: A9A
SAMC955851	The whole genome sequencing of pepper: A8A
SAMC955850	The whole genome sequencing of pepper: A7A
SAMC955849	The whole genome sequencing of pepper: A6A
SAMC955848	The whole genome sequencing of pepper: A5A
SAMC955847	The whole genome sequencing of pepper: A50A
SAMC955846	The whole genome sequencing of pepper: A4A
SAMC955845	The whole genome sequencing of pepper: A48A
SAMC955844	The whole genome sequencing of pepper: A44A
SAMC955843	The whole genome sequencing of pepper: A3A
SAMC955842	The whole genome sequencing of pepper: A39A
SAMC955841	The whole genome sequencing of pepper: A34A
SAMC955840	The whole genome sequencing of pepper: A32A
SAMC955839	The whole genome sequencing of pepper: A31A
SAMC955838	The whole genome sequencing of pepper: A30A
SAMC955837	The whole genome sequencing of pepper: A2A
SAMC955836	The whole genome sequencing of pepper: A28A
SAMC955835	The whole genome sequencing of pepper: A27A
SAMC955834	The whole genome sequencing of pepper: A23A
SAMC955833	The whole genome sequencing of pepper: A21A
SAMC955832	The whole genome sequencing of pepper: A20A
SAMC955831	The whole genome sequencing of pepper: A19A
SAMC955830	The whole genome sequencing of pepper: A18A
SAMC955829	The whole genome sequencing of pepper: A17A
SAMC955828	The whole genome sequencing of pepper: A16A
SAMC955827	The whole genome sequencing of pepper: A14A
SAMC955826	The whole genome sequencing of pepper: A13A
SAMC955825	The whole genome sequencing of pepper: A12A
SAMC955824	The whole genome sequencing of pepper: A11A
SAMC955823	The whole genome sequencing of pepper: A10A
GSA (1)	-
CRA008681	The resequencing data of 215 pepper accessions