Accession

PRJCA010169

Title

A dataset of diurnal oscillations of gene transcription and epigenetic modification in Brassica napus

Relevance

Agricultural

Data types

Epigenomics
Transcriptome or Gene expression

Organisms

Brassica napus

Description

We generated a dataset of diurnal oscillation before the floral transition of Brassica napus by RNA-Seq, ChIP-seq (H3K4me3, H3K9ac, RNAPII) with sampling every four hours in two days.

Sample scope

Monoisolate

Release date

2023-09-17

Publication

PubMed ID	Article title	Journal name	DOI	Year
37907908	Diurnal oscillations of epigenetic modifications are associated with variation in rhythmic expression of homoeologous genes in Brassica napus	BMC Biology	10.1186/s12915-023-01735-7	2023

Grants

Agency	program	Grant ID	Grant title
National Natural Science Foundation of China (NSFC)	General Program	N/A

Submitter

Zhifei Xue (zhifeixue@webmail.hzau.edu.cn)

Organization

National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University

Submission date

2022-06-21

Project Data

Resource name	Description
BioSample (106) show	-
SAMC808093	ATAC-seq
SAMC808092	ATAC-seq
SAMC808091	ChIP-seq
SAMC808090	ChIP-seq
SAMC808089	ChIP-seq
SAMC808088	ChIP-seq
SAMC808087	ChIP-seq
SAMC808086	ChIP-seq
SAMC808085	ChIP-seq
SAMC808084	ChIP-seq
SAMC808083	ChIP-seq
SAMC808082	ChIP-seq
SAMC808081	ChIP-seq
SAMC808080	ChIP-seq
SAMC808079	ChIP-seq
SAMC808078	ChIP-seq
SAMC808077	ChIP-seq
SAMC808076	ChIP-seq
SAMC808075	ChIP-seq
SAMC808074	ChIP-seq
SAMC808073	ChIP-seq
SAMC808072	ChIP-seq
SAMC808071	ChIP-seq
SAMC808070	ChIP-seq
SAMC808069	ChIP-seq
SAMC808068	ChIP-seq
SAMC808067	ChIP-seq
SAMC808066	ChIP-seq
SAMC808065	ChIP-seq
SAMC808064	ChIP-seq
SAMC808063	ChIP-seq
SAMC808062	ChIP-seq
SAMC808061	ChIP-seq
SAMC808060	ChIP-seq
SAMC808059	ChIP-seq
SAMC808058	ChIP-seq
SAMC808057	ChIP-seq
SAMC808056	ChIP-seq
SAMC808055	ChIP-seq
SAMC808054	ChIP-seq
SAMC808053	ChIP-seq
SAMC808052	ChIP-seq
SAMC808051	ChIP-seq
SAMC808050	ChIP-seq
SAMC808049	ChIP-seq
SAMC808048	ChIP-seq
SAMC808047	ChIP-seq
SAMC808046	ChIP-seq
SAMC808045	ChIP-seq
SAMC808044	ChIP-seq
SAMC808043	ChIP-seq
SAMC808042	ChIP-seq
SAMC808041	ChIP-seq
SAMC808040	ChIP-seq
SAMC808039	ChIP-seq
SAMC808038	ChIP-seq
SAMC808037	ChIP-seq
SAMC808036	ChIP-seq
SAMC808035	ChIP-seq
SAMC808034	ChIP-seq
SAMC808033	ChIP-seq
SAMC808032	ChIP-seq
SAMC808031	ChIP-seq
SAMC808030	ChIP-seq
SAMC808029	ChIP-seq
SAMC808028	ChIP-seq
SAMC808027	ChIP-seq
SAMC808026	ChIP-seq
SAMC808025	ChIP-seq
SAMC808024	ChIP-seq
SAMC808023	ChIP-seq
SAMC808022	ChIP-seq
SAMC808021	ChIP-seq
SAMC808020	ChIP-seq
SAMC808019	ChIP-seq
SAMC808018	ChIP-seq
SAMC808017	ChIP-seq
SAMC808016	ChIP-seq
SAMC808015	ChIP-seq
SAMC808014	ChIP-seq
SAMC808013	RNA-seq
SAMC808012	RNA-seq
SAMC808011	RNA-seq
SAMC808010	RNA-seq
SAMC808009	RNA-seq
SAMC808008	RNA-seq
SAMC808007	RNA-seq
SAMC808006	RNA-seq
SAMC808005	RNA-seq
SAMC808004	RNA-seq
SAMC808003	RNA-seq
SAMC808002	RNA-seq
SAMC808001	RNA-seq
SAMC808000	RNA-seq
SAMC807999	RNA-seq
SAMC807998	RNA-seq
SAMC807997	RNA-seq
SAMC807996	RNA-seq
SAMC807995	RNA-seq
SAMC807994	RNA-seq
SAMC807993	RNA-seq
SAMC807992	RNA-seq
SAMC807991	RNA-seq
SAMC807990	RNA-seq
SAMC807989	RNA-seq
SAMC807988	RNA-seq
GSA (1)	-
CRA007278	A dataset of diurnal oscillations of gene transcription and epigenetic modification in Brassica napus