Accession

PRJCA010213

Title

Schistosoma japonicum strain:F4M4 Genome sequencing

Relevance

Medical

Data types

Whole genome sequencing
Transcriptome or Gene expression
Genome sequencing and assembly
Raw sequence reads
Single cell sequencing

Organisms

Schistosoma japonicum

Description

Our improved genome assembly and the genetic analyses of the Z and W chromosomes provide an improved framework for future functional analyses of S. japonicum, particularly to unravel the processes of sex determination and differentiation, which could enable the development of new interventions for the control of schistosomiasis.

Sample scope

Monoisolate

Release date

2022-06-29

Grants

Agency	program	Grant ID	Grant title
National Key R&D Program of China		2018YFA0507300

Submitter

Xindong Xu (xuxd@tongji.edu.cn)

Organization

Tongji University

Submission date

2022-06-23

Project Data

Resource name	Description
BioSample (17) show	-
SAMC809936	Invertebrate sample from Schistosoma japonicum
SAMC809935	Invertebrate sample from Schistosoma japonicum
SAMC809934	Invertebrate sample from Schistosoma japonicum
SAMC809933	Invertebrate sample from Schistosoma japonicum
SAMC809932	Invertebrate sample from Schistosoma japonicum
SAMC809931	Invertebrate sample from Schistosoma japonicum
SAMC809930	Invertebrate sample from Schistosoma japonicum
SAMC809929	Invertebrate sample from Schistosoma japonicum
SAMC809928	Invertebrate sample from Schistosoma japonicum
SAMC809927	Invertebrate sample from Schistosoma japonicum
SAMC809926	Invertebrate sample from Schistosoma japonicum
SAMC809925	Invertebrate sample from Schistosoma japonicum
SAMC809924	Invertebrate sample from Schistosoma japonicum
SAMC809923	Invertebrate sample from Schistosoma japonicum
SAMC809922	Invertebrate sample from Schistosoma japonicum
SAMC809921	Invertebrate sample from Schistosoma japonicum
SAMC809920	Invertebrate sample from Schistosoma japonicum
GSA (16) show	-
CRA007384	10X Genomics of female adult worms of Schistosoma japonicum
CRA007405	illumina of female adult worms of Schistosoma japonicum
CRA007404	illumina_350bp_rep2 of male adult worms of Schistosoma japonicum
CRA007397	PacBio of female adult worms of Schistosoma japonicum
CRA007396	HiC of paired adult worms of Schistosoma japonicum
CRA007403	illumina_350bp_rep1 of male adult worms of Schistosoma japonicum
CRA007400	illumina_5kb_rep1 of male adult worms of Schistosoma japonicum
CRA007399	illumina_2kb_rep2 of male adult worms of Schistosoma japonicum
CRA007398	illumina_2kb_rep1 of male adult worms of Schistosoma japonicum
CRA007395	RNA-seq of female worms
CRA007401	llumina_5kb_rep2 of male adult worms of Schistosoma japonicum
CRA007392	RNA-seq of paired eggs
CRA007393	RNA-seq of male worms
CRA007394	RNA-seq of paired cercariae
CRA007383	PacBio SMRT rep2 of Eggs, cercariae, schistosomulum, and female and male worms
CRA007338	PacBio SMRT rep1 of Eggs, cercariae, schistosomulum, and female and male worms