Accession PRJCA011134
Title Chromosomal level reference genome of Tiarella polyphylla (Saxifragaceae)
Relevance Evolution
Data types Assembly
Organisms Tiarella polyphylla
Description Tiarella polyphylla D. Don, which belongs to Saxifragaceae, has a wide distribution from the Himalayas all the way east to Hokkaido. It occupies two subkingdoms in East Asia, the Sino-Japanese subkingdom, and the Sino-Himalayan subkingdom, and the unique geographical distribution pattern makes it an ideal model to test the boundary of these two floristic regions and to reveal the cause of its formation. Moreover, the whole T. polyphylla plant is usually used as medicine, mainly for treatment of bruises, asthma, audition trouble and skin eruptions.Despite its importance, molecular resources for T. polyphylla remain limited and no reference genome has been published to date. In this study, we generated a chromosome-level de novo assembly and annotation of the whole genome of T. polyphylla as the first genome for Saxifragaceae using a combination of Illumina, Nanopore long-read and Hi-C sequencing.
Sample scope Monoisolate
Release date 2022-09-01
Grants
Agency program Grant ID Grant title
National Natural Science Foundation of China (NSFC) FX2226F0030041
Submitter Mengzhen Chen (1026233877@qq.com)
Organization Henan University
Submission date 2022-08-10

Project Data

Resource name Description
BioSample (1) -
SAMC849364 Genome assembly and annotation of Tiarella polyphylla at chromosome level